Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0001 ATGTGGACAAATGTTTTCAAAATCGGAAGTATGCATCAGATATCTTGGTTTCAGTTTCTTCCTCATGAACCTGACCTGAACCCTCTACCTGACAAAAGTGTTAAAGTGGACCAAAAGGATGCTGCAATGTTACTGGTGCTTTCATCACATCTGCAACTTCAGAAGGAGGGGTTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCATCCCAGGGATTGCATAATCCAGATGAAAAGATTAAGCTGTGGCTTTTTCTTCGGGGGCGTCATTCATCAGTTGTTGAGACTGCTCAGACAGCAGTATCTGGATTAAGAGTTGTTGCTTCTGGGCTTTGGTTGGCTCCTGGGGATTCAGAAGAGGTTGCAGCTGCTCTCTCTCAGGCTTTAAGGAATTGTATAGAAAGAGCTTTGCTTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAATTTCAAAGAGAAGAAATTTTCAGAAGAGGACAGCCTGCAGTTGAATTTGTCTTTGCTGCAACTGAGGAGGCAATCTTCATACATGTCATAGTATCCTCAAAGCATATCCGAATGCTTTCCACAGCTGATCTGGAAAAAGTATTAAAACATTCTATGGAGTCGACATATAGACTTCCAGTAATTGTTTCTCCGCATGGAATTCGTGGCAGCTTGACTGGTTGTTCTCCTAGTGATCTTGTCAAGCAAAGCTATTTCAGCAGTTCTACCAAATTTAGGGTGTCCAATGGAATTATAGGTCTCCCATATCATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAATTGTTATGTTGAAGTAAGTCTTGGCTTCCCTAGATCTGGAACTGACAACACGTTGCAGCCAAACAAAAATAGTGTCAGGAATTTACCCAAACTTCATGTTGCTGAATCTCCTGTTGTGGGACGAAGTGATCACAAGGGACCACCAGATCATTTGTTGGATTACGATAAAACGTTTCTCTATCCAGCTGAGGCAGTGCTTGTGCCAGTCTTACAAACATCATTAGCAAGGTCTTCCTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCATCCCTGCCTGGTTCCTCTTCCTTTATTCACTGTGCTGGTAATGTGGATTGTACTGAAGATCCTTGGACTGAAATCAATGGAACCCGCACACAAAGTAGTTATGATAGTAGTAGCAATAGCAATAATAGCAGTATTAGTAGCTTAAGTGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTAGAGGCAGATGCTGATTCTTTGACGTGTAGACAGTCTATGGTATCTTCTGCTGATCAGTTGGACAGTGATGGCCCCAAATTGGGCTCTAAGCGGTCTCGAACAGGGGTGACAGAGTTGTTAAGTACAGCTACAAACATTCCTGTGCAAGATGCTTACATGTCTGATTTTGGTTCCATGGAAGTGAACAATTCAGCCATTACAGGAGTAGGAAATGAGCCAATTGGGTCTTACTGGGACTGGGATGATGATGATAGAGGCATGGAAATGGATATTCAAGCCCTTCTATCAGAGTTTGGTGATTTTGGTGACTTCTTTGAAAATGATGTTTTACCTTTTGGAGAGCCCCCAGGAACTGCAGAATCTCAGGCACTCATGCTTTCTGCCCCGGATTGTGGAGATGTCAACAGCAGTCCAGGTGGTGTGATAGATGTTCCAGATCAAATACTTTTGCCTGTTGGCTTTGCTTCCTTTGAGAGCTTTAACCCCCCTCCTTCAACATCCATAGAAGAATGTCTTAACAAAAGTCAAGATAACTTGAATAACTCCATGTCTTTGGGTCCAACCAATCAAAATCAACTGTTGTATACAAGGGAGTTTGATCATATAATGAAAGCTGAAGCAATGATGACATTCGCTCCTGAATTTGGAGCTGTTGATACCCCTACTTGTGAGTTCTCCACAACATTATTCAGAAGCCCATATTTTCCGAAATCTCGAAAAGCAAAGAGTTCAACTTCAAGTTCAAGCAATTACTTATATGGTGCAGCACCGCCCACTTCTACTTGCACTGAAGGATCAGAGGGGAAGAATGGAAAGTCCGTCAACACAAAAACAGGTTCTGGAAAACATGATGCTAGTACTATGAGTCTCCACTCAAAATATTACTACACTTTTGTGGAAAGTAGGAAAGAAAAAAATGATAAAAATCCTGCCACTTGCAATGATAACAGCATAACTAAATCTGAGGGGATGCCACCACTCTCAAACATTGGTTCTAATGCTATTGTCAAGTCTGCCATAAGGAAGACAACTGATTGCACACATGAAGCAGAGCAGTTCCTTCTATCTGCAAAAACTTTGTTGGCAACTGATATCACATGTATTATGTTGCAAGCTTCCATGTGCAGGTTACGCCATATTCTCTTGTCTTCAGGTAACCTAATGCCTGCTGGTTTGAGTAGGTCAACTGGGGTTTCATTTTTGAATCAGCTTCCTAGTGATCCAAGTATGACAACAGACAACATATCTGGCAAGTATGATGTTAAGAAGAAAGAAAATATACCAATTAGAATTGCAGGTGATATTGATGGAGGAATGCTTGATGGGCACCTTAATGCCCCTGTTGGTGTTTGGCGCACATTAGGAGCTTCCAAAGTTGTAAAACCTTCAAATTCACCTAACATGGAAGTTGTTCCTTCCTTTCCTCATAATTCTTTCAATGAAGAAGGTATCCTTTCTTATGGTCAAAGGAAACCACTTCAGGAGCTTCTTGATGGGATAGCATTACTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGTGGATTGTGGTGATGGTCCTTATGGTTTGCTTGCAATGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGCCTTCCATGGTCCATGCTGGCTGTGGGGGAAGTCTTGCCTCTTCTCATTCATTGGACATTGCTGGCTTGGAGTTAGTGGATCCACTTTCTGCTGATGTTCATGCATCCACTGTCATCAGTTTGCTGCAGTCTGACATAAAAACAGCTTTGAAATCTGCTTTTCCCAATTTGGAAGGGCCATTATCTGTAACTGATTGGTGCAAAGGACGCAATCAATTGATTGATACTGGAAGCGTAGTTGATGGAGTTTCTGCTGAATCCAACATTAATGAATGTAGGGATTCTTCAGAACCAATGAGTCCATCTCAATCATCTGTTGGTGGATCTTCCAGTATTAAGGTTTCCAACATGATGGATAAGGTGGATGAGACTTCTCAAAGGAGATCTGGCCAAGATTTATGCAGCACAGAGTCAGAGCAGCAAACATGTTCCCGGCTAAAACCTACTCTCATTGCTCTTCCGTTTCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGACATCAGCAAACTCTTTGCAGCACTGGGAGAAGGCTCCTCTAGAGCCCTATGCTCTACAGAAACCTATTACGTATCATGTTGTATGTCCCGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTATGAGACATGCAAGCTAGGTACTCATTCACCTCAAGGCTTGGGGAATCAGATAGAGATAGAGTCTGCAAAGTTGTCATCTTGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCAATGCATCTCTTGTTGGTTCAGTAAGTGATTATTTTTTATCTTTATCTAATGGTTGGGACCTGACTAGTTATCTCAAGTCTCTTTCAAAGGCACTTAGAGGTTTGAAAATTGGCTCTTGCTTTTCTACAAACCCCAGCGAAGGAAGTAACAGCTCATGCTTGGTAATCTATGTGGTGTGCCCATTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAGTCTTCTGTTGCCATTGGATCGGTTGTCCAACAGTCGGATAGAGAGAGGAGATCTAGCTTGCATAGTCAGGTTGTGAAGGCATTAAGTGGCTTGGCCACTGTCGATGAAGCTTCAGCGTCTAATATCCTTGTGCTTTCTGGGTTTAGTATTCCAAAATTGGTCTTGCAGATAGTTACAGTGGATGCCATTTTCAGAGTCACAAGCCCATCTGTTAGTGAGCTTGTCATTTTAAAAGAGACTTCCTTTACTGTATACAGCAAGGCTCGTCGCATTTCACGTGGAATCTCTAGTGATTTTGCTCAATCTGCATTTTCTAGTAGATCTCATTCTGGTTTGACACAAATGCCTTCTCCCATCTCTGGGATGTGGAAAGACTGTGTTGGTCCTCGAATGGCAGGACATTCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGCCTGGTACTTGGGATAATTCTTGGCAACCAACAAGGACTGGGGGGTTAAGCTGTGATCCAAGTAGAACTGGGGATAATTTTCTTCATGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTCGCAGAACCAGGTTCTCTTGAAAATGGTATTTCAGTTATTGGTAGTCCCACTTCAGAATCTTCCAAGGCATTGGCAGATGACAGTAGTGGTAACTATGTACAGAGTACAAGTACAGCAGGAAGTGTGGAGTCTGCTTCAAGCACTGATGCATCTGGGTCCGATCCAAAGACTCCTCCAAGCCTACATTGTTGCTATGGATGGACTGAGGACTGGCGTTGGCTCGTGTGCATCTGGACAGACTCAAGGGGAGAATTGCTGGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGCAGGCAGGATACAAAGGGTCTGCAGTGCCTATTTGTTCAAATTCTTCAACAAGGTTGTCTGATACTTCAATCTTGTGATCCTGGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTTTATGAGCTCGAGTACCTTGAGTGGCAGAAAGCCATTTATTCAGTTGGTGTATCTGAGATGAAGAGATGGCCTCTGCAATTGCGGAAATCTATGTCTGATGGGATGTCTGCAACTAGTAATGGTTCTTCTTTGCAACAATCAGATATGAGTTTGATCCCAGAAAGAACTCTTCCTTCCTCACCGAGTCCTTTGTACAGCCCTCATACCAAATCCCCTGGTTTTATGAAAGGCAGTTTAGGGCAACCTACTGCAAGAAAGCAACTTATCGGTGGACATTCTATGGTTGACAATTCTAGGGGTTTGCTTCATTGGGCGCAAAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACTTTACAACTAGTTCTCCCAGCAGATTCATCAACTCCTGGTTACATAGAAGGTTTCACTCCAGTTAAGTCTCTTGGTTCTACGTCTTCTGCATATATTCTAATTCCTTCTCCTAGCATGCGGTTCCTTCCTACAACAGTTCTTCAACTCCCAACATGCCTCACAGCAGAGTCGCCACCACTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCTCTCTCTACTGGATTTGTGGTTTCAAAAGCTGTACCTTCCATGAGGAAGGACTATAGAGCCAACCAAAAAGAAGAATGGCCCTCTGTACTTTCAGTGAGCCTCATTGATTATTATGGAGGTACTAACATCCCCCAAGAGAAGATTGTCCGAGGAATTAACAAGCAAGGTGGTAGAAGTTTAAGCTGGGAAGCTAAAGATTTTGAAATTGAGACCCACTTGGTTCTGGAGTCTCTTGCAGCAGAGCTTCATGCCTTGTCATGGATGACAGTGAGCCCCACATACTTAGAGCGGCGAACAGCACTTCCTTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTTGCTGATAAAGAGCTCTCCAAGCAGTCCGAGAAATCTTGA 5859 0.4304 MWTNVFKIGSMHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLRGRHSSVVETAQTAVSGLRVVASGLWLAPGDSEEVAAALSQALRNCIERALLGLYYMRFGDVFSKFHQFQREEIFRRGQPAVEFVFAATEEAIFIHVIVSSKHIRMLSTADLEKVLKHSMESTYRLPVIVSPHGIRGSLTGCSPSDLVKQSYFSSSTKFRVSNGIIGLPYHVSQGVGCQLRGQNCYVEVSLGFPRSGTDNTLQPNKNSVRNLPKLHVAESPVVGRSDHKGPPDHLLDYDKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPGSSSFIHCAGNVDCTEDPWTEINGTRTQSSYDSSSNSNNSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSMVSSADQLDSDGPKLGSKRSRTGVTELLSTATNIPVQDAYMSDFGSMEVNNSAITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMLSAPDCGDVNSSPGGVIDVPDQILLPVGFASFESFNPPPSTSIEECLNKSQDNLNNSMSLGPTNQNQLLYTREFDHIMKAEAMMTFAPEFGAVDTPTCEFSTTLFRSPYFPKSRKAKSSTSSSSNYLYGAAPPTSTCTEGSEGKNGKSVNTKTGSGKHDASTMSLHSKYYYTFVESRKEKNDKNPATCNDNSITKSEGMPPLSNIGSNAIVKSAIRKTTDCTHEAEQFLLSAKTLLATDITCIMLQASMCRLRHILLSSGNLMPAGLSRSTGVSFLNQLPSDPSMTTDNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGASKVVKPSNSPNMEVVPSFPHNSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDVDCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCGGSLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKSAFPNLEGPLSVTDWCKGRNQLIDTGSVVDGVSAESNINECRDSSEPMSPSQSSVGGSSSIKVSNMMDKVDETSQRRSGQDLCSTESEQQTCSRLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQIEIESAKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRGLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQSDRERRSSLHSQVVKALSGLATVDEASASNILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETSFTVYSKARRISRGISSDFAQSAFSSRSHSGLTQMPSPISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNSWQPTRTGGLSCDPSRTGDNFLHDEIRYMFEPLFILAEPGSLENGISVIGSPTSESSKALADDSSGNYVQSTSTAGSVESASSTDASGSDPKTPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLILQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGMSATSNGSSLQQSDMSLIPERTLPSSPSPLYSPHTKSPGFMKGSLGQPTARKQLIGGHSMVDNSRGLLHWAQSISFVAVSMDHTLQLVLPADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPTTVLQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRANQKEEWPSVLSVSLIDYYGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSPTYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS* 1953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0001 1952 MobiDBLite consensus disorder prediction 1446 1466 - -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 1452 1466 - -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 1058 1082 - -
Gso18g0001 1952 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1945 - -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 1509 1550 - -
Gso18g0001 1952 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1945 - -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 385 423 - -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 734 754 - -
Gso18g0001 1952 Pfam MID domain of medPIWI 1267 1393 IPR041285 -
Gso18g0001 1952 Pfam MID domain of medPIWI 1157 1272 IPR041285 -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 685 713 - -
Gso18g0001 1952 Pfam Mediator complex subunit 13 N-terminal 2 341 IPR021643 -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 739 754 - -
Gso18g0001 1952 MobiDBLite consensus disorder prediction 1509 1547 - -
Gso18g0001 1952 Pfam Mediator complex subunit 13 C-terminal domain 1551 1931 IPR009401 GO:0003712|GO:0006357|GO:0016592
Gso18g0001 1952 MobiDBLite consensus disorder prediction 385 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0001 Gso-Chr18 8731 46299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0001 K15164 - gmx:100782017 3800.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0001 18 8731 46299 Gso13g1621 13 31413783 31469672 GST