Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1621 ATGTGGACAAATGTTTTCAAAATCGGAAGTCTGCATCAGATATCTTGGTTTCAGTTTCTTCCTCATGAACCTGACCTGAACCCTCTACCTGACAAAAGTGTAAAAGTGGACCAAAAGGATGCCGCAATGTTACTGGTGCTTTCATCACATCTGCAACTTCAGAAGGAGGGGTTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCATCCCAGGGATTGCATAATCCAGACGAAAAGATTAAGCTGTGGCTTTTTCTTCCGGGCCGTCATTCATCAGTTGTTGAGACTGCTCAGACAGCAGTATCTGGATTAAGAGTTGTTGCTTCTGGGCTTTGGTTGGCTCCTGGGGATTCAGAAGAGGTTGCAGCTGCTCTCTCTCAGGCTTTAAGGAATTGTGTAGAAAGAGCTTTGTTTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAATTTCAAAGAGAAGAACTTTTCAGAAGAGGACAGCCTGCAGTTGAGTTTGTCTTTGCTGCAACTGAGGAGGCAATCTTCATACATGTCATAGTATCCTCAAAGCATATCCGAATGCTTTCCACAGCTGATCTGGAAAAAGTATTACAACATTCTATGGAGTTTACATATAGACTTCCAGTGATTGTTTCTCCACATGGAATTTGTGGCAGCTTGACTGGTTGTTCTCCTAGTGATCTTGTCAAGCAAAGCTACTTCAGTTCTACCAAATTTAGGGTGTCCAATGGAATTATAGGTCTCCCATATCATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAATTGTTATGTTGAAGTAAGTCTTGGCTTCCCTAGATCTGGAACTGACAACACGTTGCAGCCAAACAAAAATAGTGTTAGGAATTTACCCAAACTTCATGTTGCCGAATCTCCTATTGTGGGACGAAGTGATCACAAGGGATCACCAGATCATTTGTTGGATTATGATAAAACATTTCTCTATCCAGCTGAGGCAGTGCTTGTGCCAGTTTTACAAACATCATTAGCAAGGTCTTCCTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCATCCCTGCCTGGTTCCTCTTCCTTTATTCACTGTGCTGGTAATGTGGATTGTACTGAAGATCCTTGGACCGAAATCAATGGAACCCGCACACAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGTATTAGTAGCTTAAGTGCCAGCTCTAGTGATAGTGATTACAAGACTACAAGACCAAGTGAACTAGAGGCAGATGCTGATTCTTTGACGTGTAGACAGTCTATGGTATCTTCTGCTGATCAGTTGGACAGTGATGGCCCCAAATTGGGCTCTAAGCGGTCTCGAACAGGGGTGACAGAGTCATTAAGTACAGCTACAAACATTCCTGTGCAAGATGCTTACATGTCTGATTTTGGTTCCATGGAAGTGAACAATTCAGCCATTACAGGAGTAGGAAATGATCCAATTGGGTCTTACTGGGACTGGGATGATGATGATAGAGGCATGGAAATGGATATTCAAGCCCTTCTATCAGAGTTTGGTGATTTTGGTGACTTCTTTGAAAATGATGTTTTGCCTTTTGGAGAGCCCCCAGGAACTGCAGAATCTCAGGCACTTATGCTTTCTGCCCCGGATTGTGGAGATGTCAACAGCAGTCCAGGTGGTGTGATAGATGTTCCAGGTCAAATACTTTTGCCTGTTGGGTTTCCTTCCTTTGAGAGCTTTAACCCCCCTCCTTCAACATCCATAGAGGAATGTCTTAACAAAAGTCAAGATAACTTGAATAACTCCATGTCTTTGTGTCCAACCAATCAAACTCAACTGTTGTATACGAGGGAGTTTGATCATATTATGAAAGCTGAAGCAATGATGACATTTGCTCCTGAATTTGGAGCTGTTGATACCCCTACTTGTGAGTTGTCCACAACATTATTCAGAAGCCCATATTTTCCAAAATCTCGAAAAGCAAAGAGTTCAAATTCAAGTTCAAACAATTATTTATATGGTGCAGCACCACCCACTTCTCCTTGCACTGAAGGATCAGAGGGGAAGAATGGAATGTCTGCCAACACAAAAACAGGTTCTGGAAAATATGATGCTAGTACTACGAGTCTCCACTCGAAATATTACTATACTTTTGTGGAAAGTAGGAAAGAAAAAAATGATAAAAATCCTGCCACATGTAATGATAACAGCATAACTAAATCTGAGGGGATACCACCACTCTCAAACATTGGTTCTAATGCTATTGTCAAATCTGCCATAAGGAAGACAACTGAAGGCACACATGAAGCAGAGCATTTCCTTCTATCTGCAAAAACTTTATTAGCAACTGATATCACATGTGTTACGTTGCAAGCTTCCATGTGCAGGTTACGCCATATTCTCTTATCTTCAGGTAACCTAATGCCTGTTGGTTTGAGTAGGTCAACTGGGGTTTCATTTTTGAATCAGCTTCCTAGTGATCCAAGTATGACAACAGACAACATATCTGGCAAGTATGATGTGAAGAAGAAAGAAAATATACCAATTAGAATTGCAGGTGATATTGATGGTGGAATGCTTGATGGCCACCTTAATGCCCCTGTTGGTGTTTGGCGCACATTAGGAGCTTCAAAAGTTGTAAAACCTTCAAATTCACCTAACATGGAAGTTGTTCCTTCCTTTCCTCATAATTCTTTCAATGAAGAGGGTATCCTTTCTTATGGTCTAAGGAAACCACTTCAGGAGCTTCTTGATGGGATAGCATTACTCGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGCGGATTGTGGTGATGGTCCTTATGGTTTGCTTGCAATGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGCCTTCCATGGTCCATGCTGGCTGTGGGGGAAGTCTTGCCTCTTCTCATTCATTGGACATTGCTGGCTTGGAGTTAGTGGATCCACTTTCTGCTGATGTTGATGCATCCACTGTCATTAGTTTGCTGCAGTCTGACATAAAAACGGCTTTGAAATCTGCTTTTTCCAATTTGGAAGGGCCATTATCTGTAACTGATTGGTGCAAAGGACGCAATCAATTGGTTGATACTGGAAGCATAGTTGATGGAGTTTCTGCTGAATCCAGCATTAATGAATGTAGGGATTCTTCAGAACCAATGAGTCCATCCCAATCATCTGTTGGTGGATCTTCCAGTATTAAGGTTTCCAACTTGATGGATAAGGTGGATGAGACTTCTCAAAGGAGATCTGGCCAGGATTTATGCAGTACAGAGTTAGAGCAGCTATCATGTTCCCGGCTAAAACCTACTCTCATTGCTCTTCCATTTCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGACATCAGCAAACTCTTTGCAGCACTGGGAGAAGGCTCCTCTAGAGCCCTATGCTCTACAGAAACCTATTACCTATCATGTTGTATGTCCCGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTATGAGACATGCAAGCTAGGTACTCATTCACCTCAAGGCTTGGGGAATCAGATGGAGATAGAGTCCGCAAAGTTGTCATCTTGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATAAAGATTGAGAGCAGCAATGCATCTCTTGTTGGTTCAGTAAGTGATTATTTTTTATCTTTATCTAATGGTTGGGACCTGACTAGTTATCTCAAGTCTCTTTCAAAGGCACTTAGAGGTTTGAAAATTGGCTCTTGCTTTTCTACAAACCCCGGCGAAGGAAGTAACAGTTCATGCTTGGTAATCTATGTGGTGTGCCCATTTCCTGATCCCACTGCAATTTTGCAAACTGTAATCGAATCTTCTGTTGCCATTGGATCGGTTGCCCAACAGTCAGATAGAGAGAGGAGATCTAGCTTGCACAGCCAGGTTGTGAAGGCATTAAGTGGCTTGACCACTGTCGATGAAGCTTCAGCGTCTAATATCCTTGTGCTTTCTGGGTTTAGTATTCCAAAATTGGTCTTGCAGATAGTTACAGTGGATGCCATTTTCAGAGTCACAAGCCCATCTGTTAGTGAGCTTGTCATTTTAAAAGAGACTGCCTTTACTGTATACAGCAAGGCTCGTCGCATTTCACGTGGAATCTCTAGTGATTTTGCTCAATCTGCATTTCCTAGATCTCATTCTGTTTTGACACAAATGCCTTCTCTCATCTCTGGGATGTGGAAAGACTGTGTTGGTCCTCGAATGGCAGGACATTCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGCCTGGTACTTGGGATAATTCTTGGCAACCAACAAGGACTGGGGGGTTAAGCTGTGATCCAAGTAGAACTGGAGATAATTTTCTTTATGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTCGCAGAACCAGGTTCTCTTGAAAATGGTATTTCAGTTATTGGTAGTCCCACTTCAGAATCTTCCAAGGCATTGGCAGATGACAGTAGTGGTAACTATGCACAGAGTACAAGTACAGCTGGAAATGCGGAGTCTGCTTCAAGCACTGATGGATCTGGGTCCGATCCGGAGACTCCTCCAAGCCTACATTGTTGCTATGGATGGACTGAAGACTGGCGTTGGCTCGTATGCATCTGGACAGACTCAAGGGGAGAATTACTGGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGCAGGCAGGATACAAAGGGTCTGCAGTGCCTATTTGTTCAAATTCTTCAGCAAGGTTGTCTGATACTTCAATCTTGTGATCCTGGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTTTATGAGCTCGAGTACCTTGAGTGGCAGAAAGCCATTTATTCAGTTGGTGTATCTGAGATGAAGAGATGGCCTCTGCAATTGCGGAAATCTATGTCTGATGGGATGTCTGCAACTAGTAATGGTTCTTCTTTGCAACAATCAGATATGAGTTTGATCCCCGAAAGAACTCTTCCTTCCTCACCTAGTCCTTTGTACAGCCCTCATACTAAATCCACTAGTTTTATGAAAGGCAGTTTAGGGCAACCTACTGCAAGAAAGCAGCTTATGGGTGGACATTCTATGGTTGACAATTCTAGGGGTTTGCTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACGTTACAACTAGTTCTGCCAGCAGATTCATCAACTCCTGGTTACATAGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACGTCTTCTGCATATATTCTAATTCCTTCTCCTAGCATGCGGTTCCTTCCTCCAACAGTTCTTCAACTCCCCACATGCCTCACAGCAGAGTCACCACCACTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCGCTCTCTACTGGATTTGTGGTTTCAAAAGCAGTACCTTCCATGAGGAAGGACTATAGAAGCAACCAAAAAGAAGAATGGCCCTCTATACTGTCAGTGAGCCTCATTGATTATTATGGAGGTACTAACATCCCCCAAGAGAAGATTGTCCGAGGAATTAACAAGCAAGGTGGTAGAAGTTTAAGCTGGGAAGCTAAAGATTTTGAAATTGAGACCCACTTGGTTCTGGAGTCTCTTGCAGCAGAGCTTCATGCCTTGTCATGGATGACGGTAAGTCCCACGTACTTAGAGCGGCGAACAGCACTTCCTTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCATTTTGCTGATAAAGAGCTCTCCAAGCAGTCAGAGAAATCTTGA 5853 0.429 MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQTAVSGLRVVASGLWLAPGDSEEVAAALSQALRNCVERALFGLYYMRFGDVFSKFHQFQREELFRRGQPAVEFVFAATEEAIFIHVIVSSKHIRMLSTADLEKVLQHSMEFTYRLPVIVSPHGICGSLTGCSPSDLVKQSYFSSTKFRVSNGIIGLPYHVSQGVGCQLRGQNCYVEVSLGFPRSGTDNTLQPNKNSVRNLPKLHVAESPIVGRSDHKGSPDHLLDYDKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPGSSSFIHCAGNVDCTEDPWTEINGTRTQNSYDSSSNSNSSSISSLSASSSDSDYKTTRPSELEADADSLTCRQSMVSSADQLDSDGPKLGSKRSRTGVTESLSTATNIPVQDAYMSDFGSMEVNNSAITGVGNDPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMLSAPDCGDVNSSPGGVIDVPGQILLPVGFPSFESFNPPPSTSIEECLNKSQDNLNNSMSLCPTNQTQLLYTREFDHIMKAEAMMTFAPEFGAVDTPTCELSTTLFRSPYFPKSRKAKSSNSSSNNYLYGAAPPTSPCTEGSEGKNGMSANTKTGSGKYDASTTSLHSKYYYTFVESRKEKNDKNPATCNDNSITKSEGIPPLSNIGSNAIVKSAIRKTTEGTHEAEHFLLSAKTLLATDITCVTLQASMCRLRHILLSSGNLMPVGLSRSTGVSFLNQLPSDPSMTTDNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGASKVVKPSNSPNMEVVPSFPHNSFNEEGILSYGLRKPLQELLDGIALLVQQAISFVDLALDADCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCGGSLASSHSLDIAGLELVDPLSADVDASTVISLLQSDIKTALKSAFSNLEGPLSVTDWCKGRNQLVDTGSIVDGVSAESSINECRDSSEPMSPSQSSVGGSSSIKVSNLMDKVDETSQRRSGQDLCSTELEQLSCSRLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQMEIESAKLSSCGFVLLDCPQSIKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRGLKIGSCFSTNPGEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVAQQSDRERRSSLHSQVVKALSGLTTVDEASASNILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYSKARRISRGISSDFAQSAFPRSHSVLTQMPSLISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNSWQPTRTGGLSCDPSRTGDNFLYDEIRYMFEPLFILAEPGSLENGISVIGSPTSESSKALADDSSGNYAQSTSTAGNAESASSTDGSGSDPETPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLILQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGMSATSNGSSLQQSDMSLIPERTLPSSPSPLYSPHTKSTSFMKGSLGQPTARKQLMGGHSMVDNSRGLLHWAQSISFVAVSMDHTLQLVLPADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTVLQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNQKEEWPSILSVSLIDYYGGTNIPQEKIVRGINKQGGRSLSWEAKDFEIETHLVLESLAAELHALSWMTVSPTYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS* 1951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1621 1950 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1943 - -
Gso13g1621 1950 Pfam MID domain of medPIWI 1273 1392 IPR041285 -
Gso13g1621 1950 Pfam MID domain of medPIWI 1156 1271 IPR041285 -
Gso13g1621 1950 MobiDBLite consensus disorder prediction 1057 1078 - -
Gso13g1621 1950 MobiDBLite consensus disorder prediction 663 711 - -
Gso13g1621 1950 Pfam Mediator complex subunit 13 N-terminal 2 340 IPR021643 -
Gso13g1621 1950 Pfam Mediator complex subunit 13 C-terminal domain 1549 1929 IPR009401 GO:0003712|GO:0006357|GO:0016592
Gso13g1621 1950 MobiDBLite consensus disorder prediction 663 683 - -
Gso13g1621 1950 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1943 - -
Gso13g1621 1950 MobiDBLite consensus disorder prediction 1507 1545 - -
Gso13g1621 1950 MobiDBLite consensus disorder prediction 384 469 - -
Gso13g1621 1950 MobiDBLite consensus disorder prediction 1507 1548 - -
Gso13g1621 1950 MobiDBLite consensus disorder prediction 690 711 - -
Gso13g1621 1950 MobiDBLite consensus disorder prediction 384 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1621 Gso-Chr13 31413783 31469672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1621 K15164 - gmx:100781873 3779.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0001 18 8731 46299 Gso13g1621 13 31413783 31469672 GST