Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1935 ATGGAGCCTCCCACATCCTACATTTCCACCGATGAACTTCGCAAGCATAACACGCGCCACGACGCCTGGATCTCCATCCACGGCAAGATCTACGACGTCTCCTCCTGGCTCCACCGCCACCCCGGCGGCCCCCTCCCACTCCTCACCCTCGCCGGCACCGACGCCACCGACGCCTTCCTCGCCTTCCACCCTCCCAACACCGCCTCCCTCCTCCTCCCCGCCTTCTCCACCTCCCACCGTCTTTCCGACCACACCGTCTCCGCCGCCTCCTCCGACTACCGCAAGCTCTTCTCCGACCTCTCCGCGCTCAACCTCTTCAACCGCAAGGGCCACACAACCTCCATCCTCCTCTCCCTTATTCTCACCCTTTTTCCTCTCTCTGTCTGCGGCGTCCTCTTCTCCGACAGCACTTTCGTGCACGTGCTTTCCGCTGCATTGATAGGCTTTCTCTGGATTCAGAGCGGCTGGATAGGCCACGACTCCGGCCATTACAACGTGATGCTCAGCCGCCGCCTCAACCGCGCAATTCAGATTCTCTCCGGCAACATTCTCGCCGGAATCAGCATCGGCTGGTGGAAGTGGAACCACAACGCCCACCACATTGCATGCAACAGCCTCGACTATGACCCCGATCTCCAGCATTTGCCCTTCTTCGTCGTCTCCTCTAGGTTTTTCAATTCCCTCACTTCCAGATTCTACGACAGAAAGTTGAATTTCGATTCCTTTGCTAGGTTTTTGGTTAGTTACCAGCACTGGACTTTTTACCCTGTGATGTGTTTCGCTAGGGTTAATCTGTTTGCGCAGTCTTTTTTCTTGTTGTTGTCTAAGAGGAAGGTGGAGAACAGAGGCAGTGAGCTTTTGGGTTTGCTTGCATTCTGGGTTTGGTACCCTTTGTTGGTTTCCTTCTTGCCCAATTGGTGGGAGAGGCTTTTGTTTGTTTTCGTGAGTTTCTCTGTTACGGGTATTCAGCATGTGCAGTTCTGTTTGAACCATTTTTCTTCTGAGGTGTACCTTGGGCCCCCCAGCGGCGGCGATTGGTTCGAGAAGCAGACTAAGGGGACTCTTGGTGTGGACTGCTCTCCTTGGATGGACTGGTTTCATGGAGGGTTGCAGTTTCAGGTGGAGCACCATCTGTTTCCAAGGCTGCCACGGTGCCATTTGAGGAAGATTGCGCCTTTGGTTAAGGATCTTTGCAAGAAACATAATCTTCCTTATAATTGTGTGTCGTTCTGGAAGGCCAATGTGCTGACGATTCAGACCTTGAGGAATGCTGCTTTGCAGGCCAGAGACGGTTCCAATCCGGTTCCAAAGAATTTGGTTTGGGAGGCTGTTAACACTCATGGATGA 1347 0.5367 MEPPTSYISTDELRKHNTRHDAWISIHGKIYDVSSWLHRHPGGPLPLLTLAGTDATDAFLAFHPPNTASLLLPAFSTSHRLSDHTVSAASSDYRKLFSDLSALNLFNRKGHTTSILLSLILTLFPLSVCGVLFSDSTFVHVLSAALIGFLWIQSGWIGHDSGHYNVMLSRRLNRAIQILSGNILAGISIGWWKWNHNAHHIACNSLDYDPDLQHLPFFVVSSRFFNSLTSRFYDRKLNFDSFARFLVSYQHWTFYPVMCFARVNLFAQSFFLLLSKRKVENRGSELLGLLAFWVWYPLLVSFLPNWWERLLFVFVSFSVTGIQHVQFCLNHFSSEVYLGPPSGGDWFEKQTKGTLGVDCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDGSNPVPKNLVWEAVNTHG* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1935 448 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 85 IPR001199 -
Gso17g1935 448 PANTHER FATTY ACID DESATURASE 2 5 447 IPR012171 GO:0016491
Gso17g1935 448 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 75 IPR036400 -
Gso17g1935 448 CDD Delta6-FADS-like 141 403 - -
Gso17g1935 448 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 69 IPR001199 -
Gso17g1935 448 SMART Cyt_b5_2 8 82 IPR001199 -
Gso17g1935 448 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 5 447 - -
Gso17g1935 448 Gene3D - 2 77 IPR036400 -
Gso17g1935 448 PIRSF FA_sphingolip_des 2 435 IPR012171 GO:0016491
Gso17g1935 448 Pfam Fatty acid desaturase 138 407 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1935 Gso-Chr17 38503606 38505847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1935 2 448 Lipid Metabolism Gene Families AT2G46210 61.521 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1935 K21737 - gmx:100776476 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0840 14 9246328 9248486 Gso17g1935 17 38503606 38505847 GST