Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0840 ATGGACCCTCCCACATCCTACATTTCCTCCGATGAGCTCCGCAAGCACAACACGCGCCACGACGCCTGGATCTCCATCCACGGCAAGGTCTACGACGTCTCCTCCTGGCTCCACCGCCACCCCGGCGGCCCCCTCCCCCTCCTCAGCCTCGCCGGCACCGACGCCACTGACGCCTTCCTCGCCTTGCACCCCCCGAACTCCGCCTCCCTCCTCCTCCCCGCCTTCGCCACCCCCCACCTCCTCTCGGACCACTCCGTCTCCCCCGCCTCCTCCGACTACCGCAAGCTCTTCTCCGACCTCTCCTCTCTCAACCTCTTCAACCGCAAGGGCCACACCACTTCCATCCTCCTCTCCCTTATACTCGTCCTTTTCCCTCTCTCCCTCTGTGGAGTCCTGCTCTCTGACAGCACGTGCGTGCACGTGCTGTCCGGAGCATTAGTAGGCTTCCTCTGGATTCAGAGCGGCTGGATAGGCCACGACTCCGGCCATTACAATGTCATGCTCAACCCCCGCCTCAACAGAGCAATCCAGATTCTCTCCGGCAATGTCCTCTCCGGAATCAGCATCGGCTGGTGGAAGTGGAACCACAACGCCCACCACATTGCATGCAACAGCCTCGACTTCGACCCCGATCTCCAGCATTTGCCCTTCTTCGTCGTCTCCTCTAGCTTTTTCAACTCCCTCACTTCCAGATTCTATGAAAGAAAGATGAATTTCGATTCCTTCTCTAGGTTTTTGGTTAGTTATCAGCACTGGACTTTTTACCCCGTGATGTGTTTCGCTAGGATTAACTTGTTTGCACAGTCTTTTTTCTTGTTATTGTCTAAGAGGAAGGTGGAGAACAGATGGAGTGAGCTTTTGGGGCTGCTTGCGTTCTGGGTTTGGTACCCTTTGTTGGTTTCCTTCTTGCCCAATTGGTGGGAGAGGGTTTTGTTTGTTTTTGTGAGCTTTTCTGTTACGGGTATTCAGCATGTGCAGTTCTGTTTGAACCATTTCTCCTCGGAGGTGTACCTAGGGCCACCGAGCGGCGGCGATTGGTTCGAGAAGCAGACCAAAGGGACTCTTGGTGTGGACTGCTCTCCTTGGATGGACTGGTTTCACGGCGGCTTGCAGTTTCAGGTGGAGCACCATCTGTTTCCCCGGCTGCCACGGTGCCATTTGAGGAAGATTGCGCCATTGGTTAAGGATCTTTGCAAGAAGCATAATCTTCCTTATAATTGTGTGTCGTTCTGGAAGGCCAATGTGCTGACGATTCAGACTCTGAGGAATGCTGCTTTGCAGGCAAGAGATGGTTCCAAGCCGGTTCCCAAGAACTTGGTTTGGGAGGCTGTTAACACTCATGGATGA 1347 0.5464 MDPPTSYISSDELRKHNTRHDAWISIHGKVYDVSSWLHRHPGGPLPLLSLAGTDATDAFLALHPPNSASLLLPAFATPHLLSDHSVSPASSDYRKLFSDLSSLNLFNRKGHTTSILLSLILVLFPLSLCGVLLSDSTCVHVLSGALVGFLWIQSGWIGHDSGHYNVMLNPRLNRAIQILSGNVLSGISIGWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSSFFNSLTSRFYERKMNFDSFSRFLVSYQHWTFYPVMCFARINLFAQSFFLLLSKRKVENRWSELLGLLAFWVWYPLLVSFLPNWWERVLFVFVSFSVTGIQHVQFCLNHFSSEVYLGPPSGGDWFEKQTKGTLGVDCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDGSKPVPKNLVWEAVNTHG* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0840 448 PIRSF FA_sphingolip_des 2 436 IPR012171 GO:0016491
Gso14g0840 448 SMART Cyt_b5_2 8 81 IPR001199 -
Gso14g0840 448 CDD Delta6-FADS-like 141 403 - -
Gso14g0840 448 Pfam Fatty acid desaturase 140 407 IPR005804 GO:0006629
Gso14g0840 448 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 78 IPR036400 -
Gso14g0840 448 PANTHER FATTY ACID DESATURASE 2 5 447 IPR012171 GO:0016491
Gso14g0840 448 Gene3D - 2 77 IPR036400 -
Gso14g0840 448 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 5 447 - -
Gso14g0840 448 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 70 IPR001199 -
Gso14g0840 448 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0840 Gso-Chr14 9246328 9248486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0840 7 448 Lipid Metabolism Gene Families AT2G46210 62.217 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0840 K21737 - gmx:100775880 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0840 14 9246328 9248486 Gso14g0840 14 9246328 9248486 ECH
Gso14g0840 14 9246328 9248486 Gso17g1935 17 38503606 38505847 GST