Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1887 ATGCAGAGATTCAAAGCTCTGCTACCTCAACAAACTAGGTCCTCACTTCGCACTCTCTGTTCTCACCGTCGAGCTTTCTCCGCTCAACCGAATTACGCAAAGCACCACGACGACGATTCTCAGGAACAGATTTTAGTCGAAGGAAGAGCGAAATCACGAGCAGCTATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGGCTGTATGATTCCTGGGAAGAAAACTCTGATATTGGCTTTGTTTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGCTGTATCACTCACTCAATGAAGGAAATACTGACGAAGCTGAACAGTTTTTCAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCACATGTTGCCATTTTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTCTACCAGGAATGTTCCGTGTGGTAACTGATAAAACTGTTTTTTCTCACCCAGAAGCTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATGTTTTGTCTCGTCTACCTGGCTACTTAGGGGAATACTTGGCCCTTACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCATTATTCACTAAATGCAAGGCTCTCTTTGCTTGAAGAACGTCTTGGTAAACTAATCACAGACGAACCTTCTGTTGTGGAGTCATCCCTCGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTGTCCTTCACAGGATTGATACTATTGATAGATGTTTCAGTCACGAAACTGTGGAGGAAATTATTGAAGCTTTGGAGAAAGAGGCTGCTGAGTCTAATGACGAATGGTACTCGACTACTCTAAGGAGAATAAGAGAAGCCTCCCCGTTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTGAAACACTTGATAAATGTCTTGTACGTGAGTATCGCATGTCCCTACGTGGTATTTCAAAGCATGTCTCCTCTGATTTCTTTGAGGGTGTTCGGGCACGAATGGTTGATAGAGATTTTGCACCAAAGTGGGACCCACCTAGATTAAAAGATATATCAGAGGACATGGTTGAATACTATTTCTCTCCTTTAAGTGAAGTTCAATCTGAATTAGTGCTGCCAACAGCTTTGCGAGAACCTTACATGTGA 1224 0.4257 MQRFKALLPQQTRSSLRTLCSHRRAFSAQPNYAKHHDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYHSLNEGNTDEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTVFSHPEAQIGFHPDAGASYVLSRLPGYLGEYLALTGDKLNGVEMIACRLATHYSLNARLSLLEERLGKLITDEPSVVESSLAQYGDLVYPDRSSVLHRIDTIDRCFSHETVEEIIEALEKEAAESNDEWYSTTLRRIREASPLSLKVTLQSIREGRFETLDKCLVREYRMSLRGISKHVSSDFFEGVRARMVDRDFAPKWDPPRLKDISEDMVEYYFSPLSEVQSELVLPTALREPYM* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1887 407 Pfam Enoyl-CoA hydratase/isomerase 54 386 IPR045004 -
Gso17g1887 407 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 28 407 IPR032259 GO:0003860
Gso17g1887 407 Gene3D - 38 401 - -
Gso17g1887 407 CDD crotonase-like 57 221 - -
Gso17g1887 407 Coils Coil 277 297 - -
Gso17g1887 407 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 28 407 - -
Gso17g1887 407 SUPERFAMILY ClpP/crotonase 49 372 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1887 Gso-Chr17 37754048 37763080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1887 1 407 Acyl Lipid Metabolism Gene Families AT4G31810 70.531 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1887 K05605 - gmx:100808892 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0894 14 10539089 10549619 Gso17g1887 17 37754048 37763080 GST