Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0894 ATGAATTCGGGTCGTATTTGTGGGCCTTTAAAAACCGCTGGGACCCAAGTTGGTTACCGAGGGAAAGCGTTCTTCAATTTCAGAGTTCGGGCTTCATTTCAGACTCAGAGTAACACTACAGTACAGAGTACAAACATCAAACACCTTCTCTGCACGCAAAAACCAGAATCGAAGATGCAGAGATTTAAAGCTCTGCTACCTCAACAAACTAGGTCCTCACTTCGCACTTTCTGTTCTCACCGTCGAGCTTTCTCCGCTCAACCAAATTACTCAGAGCACCACGACGACGATTCTCAGGAACAGATTTTGGTCGAAGGAAGAGCGAAATCGCGAGCAGCCATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGGCTGTATGATTCCTGGGAAGAGAACTCTGATATTGGCTTTGTTCTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGTTGTATCAATCACTCAATGAAGGAAATACTGACGAAGCTGAACAGTTTTTTAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCCCATGTTGCCATTTTGGATGGCATAACAATGGGATGTGGATCTGGAATTTCTCTGCCAGGGATGTTTCGTGTGGTAACTGATAAAACTATTTTTTCTCACCCAGAAACTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCGTCTACCTGGCTACTTAGGGGAATACTTGGCCCTCACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCATTATTCACTAAATGCAAGGCTTGCTTTGCTTGAAGAACGTCTTGGTAAACTAATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTGTCCTTCACAGGATTGATACAATTGATAGATGTTTCAGTCAAGAAACTGTGGAGGAAATTATTGAAGCTTTGGGGAAAGAAGCTACTGAATCTTGTGACGAATGGTGTTTGAATACTCTAAGGAGAATAAGAGAAGCCTCCCCTTTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTGAAACTCTCGATAAATGTCTTATACGTGAGTACCGCATGTCCCTACGTGGAATTTCTAAGCTTGTCTCCTCTGATTTCTTCGAGGGTGTTCGAGCACGAATGGTTGATAAAGATTTTGCACCAAAGTGGGACCCACCTAGTTTAAAAGATATATCAGAGGACATGATTGAATACTATTTCTCTCCTTTAAGTGAAGTTCAATCTGAACTAGTGCTGCCAACGGCTTTGCGAGAACCTTACATGTGA 1398 0.4249 MNSGRICGPLKTAGTQVGYRGKAFFNFRVRASFQTQSNTTVQSTNIKHLLCTQKPESKMQRFKALLPQQTRSSLRTFCSHRRAFSAQPNYSEHHDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYQSLNEGNTDEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTIFSHPETQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACRLATHYSLNARLALLEERLGKLITDEPSVVEASLAQYGDLVYPDRSSVLHRIDTIDRCFSQETVEEIIEALGKEATESCDEWCLNTLRRIREASPLSLKVTLQSIREGRFETLDKCLIREYRMSLRGISKLVSSDFFEGVRARMVDKDFAPKWDPPSLKDISEDMIEYYFSPLSEVQSELVLPTALREPYM* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0894 465 Gene3D - 95 459 - -
Gso14g0894 465 SUPERFAMILY ClpP/crotonase 107 430 IPR029045 -
Gso14g0894 465 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 87 465 IPR032259 GO:0003860
Gso14g0894 465 CDD crotonase-like 115 279 - -
Gso14g0894 465 Pfam Enoyl-CoA hydratase/isomerase 112 444 IPR045004 -
Gso14g0894 465 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 87 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0894 Gso-Chr14 10539089 10549619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0894 59 465 Acyl Lipid Metabolism Gene Families AT4G31810 70.000 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0894 K05605 - gmx:100790810 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0894 14 10539089 10549619 Gso14g0894 14 10539089 10549619 ECH
Gso14g0894 14 10539089 10549619 Gso17g1887 17 37754048 37763080 GST