Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1867 ATGGAACAACACCACCACCAACAACCTCAACCCAACAACAATGGTTCCAACACCACCACCACCACCACCGACCCTTTCCTCCTCAACTACACCACCTCGGATCTCCGAACCGCTTCGGAGTTTCTCGCCACGTGGCTCCCTTTCCTCTCACGAGATCTCTGCACTCGATGCACTATATTCCTCTCCGATCGCGTCCGCTCCATCGACCCAGGTGAAGCGCCTCAAGATGACACCCCCAATGACCAAAACGACATGGACGTCGAAGATAACTGCGACAACCATTCTCTCGGGAGTTGGAAGGACGGGGCGGAGGTGAATTCTTCCAATGTGGAGACTCCGAGCCAGAGAATGTCTTGGGCCGACATGGCCCAAGAAGACGACGAGTTTGGCGTAGAAGAAGACAACAACAACAATGGTGGGAATGTTGTTATGGGTGATTCGAATGCTTCCTCTGATGTTGCCAAGGTTGAGAAGCCTACTCTGCCGAGGGAACAGAGGGAGTACATTAGGTTCATGAATGTGAGGCGAAAGAAGGACTTTATCTGCTTTGAGAGGGTTCATGGGAAGCTTGTGAACATTCTCGAAGGGCTTGAACTGCACACTGGGATTTTCAGTGCTGCTGAACAGAAGAGGATTGTTAATTATGTCGCCTCGTTGCAGGAGATGGGGAAAAAGGGAGAATTGAAAGAGCGGACGTTTTCAGCTCCCCAGAAGTGGATGAGGGGCAAGGGACGCCAAACCATCCAATTTGGGTGCTGTTACAATTATGCAGATAGAGATGGTAACCCACCTGGTATTCTTACGAATGGAATGGTTGATCCTATACCTGATCTTTTCAAGGTCATCATTCGACGTCTGGTCAAGTGGCATGTACTCCCTCCTACTTGTGTGCCAGATAGTTGCATTGTTAATATCTATGAAGAAGGGGACTGTATACCTCCACATATAGATAATCATGACTTTGTTCGACCGTTTTGCACTGTCTCATTTCTTAGTGAGTGCAATATAGTTTTTGGATCAAACTTAAAGATTGTAGGCCCTGGTGAATTTGATGGCTCAATTGCTATTCCGTTACCTATGGGATCTGTACTTGTCTTGAATGGAAATGGGGCTGATGTAGCTAAACATTGTGTGCCTGCAGTTCCTACAAAAAGGATATCGATCACATTTAGAAGAATGGATGTGGCCAGGCGGCCATTTGGGTATGTTCCAGAACCCGATCTTCAGGGGATCCAACCATTGGCCTATGAAGTTGAGCAGGAAAAGAAATCAAGTGGGCACAGACCTAGTCGTCACACAAACAGACATAAAGTCAGGAGAGGAGGTGGCAGGAATGATGCATTGGGATCTGCAACTAGAAATGATAGGTTCTCAGAGCCCCGTGACTCAAATCTAAGTTCATCAAGATCTGCATCTAGAAATGATAGGTTCTCGGAGCCCCGTGACTCGAATGTAAGTTCACCAAGATCTGCATCTAGAAATGATAGGTTCTCGGAGCCCCATGACTCGAATCTAAGTTCCTCAAGATCTGCAAATAGGTGGAGTAGGAAGCCTGGTAGTTAA 1563 0.4741 MEQHHHQQPQPNNNGSNTTTTTTDPFLLNYTTSDLRTASEFLATWLPFLSRDLCTRCTIFLSDRVRSIDPGEAPQDDTPNDQNDMDVEDNCDNHSLGSWKDGAEVNSSNVETPSQRMSWADMAQEDDEFGVEEDNNNNGGNVVMGDSNASSDVAKVEKPTLPREQREYIRFMNVRRKKDFICFERVHGKLVNILEGLELHTGIFSAAEQKRIVNYVASLQEMGKKGELKERTFSAPQKWMRGKGRQTIQFGCCYNYADRDGNPPGILTNGMVDPIPDLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVGPGEFDGSIAIPLPMGSVLVLNGNGADVAKHCVPAVPTKRISITFRRMDVARRPFGYVPEPDLQGIQPLAYEVEQEKKSSGHRPSRHTNRHKVRRGGGRNDALGSATRNDRFSEPRDSNLSSSRSASRNDRFSEPRDSNVSSPRSASRNDRFSEPHDSNLSSSRSANRWSRKPGS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1867 520 Pfam 2OG-Fe(II) oxygenase superfamily 197 391 IPR027450 -
Gso17g1867 520 Gene3D - 181 397 IPR037151 -
Gso17g1867 520 MobiDBLite consensus disorder prediction 100 117 - -
Gso17g1867 520 PANTHER RNA DEMETHYLASE ALKBH9B 18 102 - -
Gso17g1867 520 PANTHER RNA DEMETHYLASE ALKBH9B 104 475 - -
Gso17g1867 520 MobiDBLite consensus disorder prediction 1 25 - -
Gso17g1867 520 MobiDBLite consensus disorder prediction 68 117 - -
Gso17g1867 520 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 104 475 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gso17g1867 520 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 18 102 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gso17g1867 520 MobiDBLite consensus disorder prediction 418 520 - -
Gso17g1867 520 MobiDBLite consensus disorder prediction 503 520 - -
Gso17g1867 520 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 297 394 IPR005123 -
Gso17g1867 520 SUPERFAMILY Clavaminate synthase-like 193 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1867 Gso-Chr17 37424594 37428884 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1867 K10767 - gmx:100787321 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0919 14 11279624 11283887 Gso17g1867 17 37424594 37428884 GST