Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0919 ATGGACGACCAAGAACAACACCGACAACCTCAACCCAACAGCAACAACGGTTCCAACGCCGACCCTTTTCTCCTCAACTACAGCACCTCCGATCTCCGAACCGCTTCAGAGTTTCTCGCCACGTGGCTCCCTTTCCTCTCACGAGATCTCTGCACTCGATGCACCCTGTCCCTCTCCGATCGCATCCGCTCCATCGACCCAGGTGAAGCGCCTCAAAACGAAATCCCCAGTGACCAAAACGACGTCGACGTGGAGGATAACTGCGACAACTGCGACGCGCATTCTCTCGGGAGTTGGAAGGACGGGGCGGAGGTGAATAACTCCAATGTGGAGACTCCGAGCCAGAGGATTTCATGGGCCGACATGGCCCAAGAAGATGACGAGTTCGGCGACGAAGAAGACAGCAACAATGGCGGGAATTTTGCGGTGGGTGATTCGAATGCTTTCTCTCATGTGGCTAAGGTTGTGGCTGAGAAGCCTACTCTGCCGAGGGAGCAGAGGGAGTACATTAGGTTCATGAATGTGAGGCGAAAGAAGGACTTTATCTGCTTTGAGAGGGTTAACGGGAAGCTTGTGAACATTCTTGAAGGGCTTGAGCTGCACACTGGGATTTTCAGTGCTGCTGAGCAGAAGAGGATTGTTAATTATGTCGCCTCGTTGCAGGAAATGGGGAGAAAGGGGGAATTGAAAGAGCAAACGTTTTCAGCTCCCCAAAAGTGGATGAGGGGTAAGGGACGCCAAACCATCCAATTTGGGTGCTGTTACAATTATGCAGTGGATAGAGATGGTAACCCACCTGGTATTCTTGGGAATGGAATGGTTGATCCTATACCTGCTCTTTTCAAGGTCATTATTCGACGTCTTATCAAGTGGCATGTACTCCCTCCTACTTGTGTGCCAGATAGTTGCATTGTTAATATCTATGAAGAAGGGGACTGTATACCTCCACATATAGATAACCATGACTTTGTTCGACCATTTTGCACTGTATCATTTCTTAGTGAGTGCAATATAGTTTTTGGATCAAACTTAAAAATTGTAGGCCCTGGTGAATTTGATGGCTCAATTGCTATTCCGTTACCTATGGGATCTGTACTTGTCTTGAACGGAAATGGAGCTGATGTAGCTAAGCATTGCGTGCCTGCAGTTCCTACCAAAAGGATATCAATCACATTTAGAAGAATGGATGTGTCCAAGCGGCCTTTTGGGTATGTTCCAGAACCCGATCTTCAGGGGATCCAACCATTGGCCTATGAAGTTGAGCAGGAAAAGAAATCAAGTGGGCACAGACCTAGTCGTCACACAAAGAGACATAAAGACAGGAGAGGAGGTGGCAGGAATGATGCAATGGGATCTGCAACTAGAAATGATAGGTTCTTAGAGCCCCATGACTCAAATCTAAATTCACCAAGATCTGCAACTAGAAATGATAGGTTCTCGGAGCCCCGTGACTCAAATCTAAGTTCACCTAGATCTGCAACTAGAAATGATAGGTTCTCAGAGCCCCGTGACTCGAATCTAAGTTCATCAAGATCTGCAAATAGGTGGAGTAGGAAACCTGGTAGTTAA 1569 0.4755 MDDQEQHRQPQPNSNNGSNADPFLLNYSTSDLRTASEFLATWLPFLSRDLCTRCTLSLSDRIRSIDPGEAPQNEIPSDQNDVDVEDNCDNCDAHSLGSWKDGAEVNNSNVETPSQRISWADMAQEDDEFGDEEDSNNGGNFAVGDSNAFSHVAKVVAEKPTLPREQREYIRFMNVRRKKDFICFERVNGKLVNILEGLELHTGIFSAAEQKRIVNYVASLQEMGRKGELKEQTFSAPQKWMRGKGRQTIQFGCCYNYAVDRDGNPPGILGNGMVDPIPALFKVIIRRLIKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVGPGEFDGSIAIPLPMGSVLVLNGNGADVAKHCVPAVPTKRISITFRRMDVSKRPFGYVPEPDLQGIQPLAYEVEQEKKSSGHRPSRHTKRHKDRRGGGRNDAMGSATRNDRFLEPHDSNLNSPRSATRNDRFSEPRDSNLSSPRSATRNDRFSEPRDSNLSSSRSANRWSRKPGS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0919 522 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 16 102 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gso14g0919 522 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 106 480 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gso14g0919 522 SUPERFAMILY Clavaminate synthase-like 194 395 - -
Gso14g0919 522 Gene3D - 182 400 IPR037151 -
Gso14g0919 522 Pfam 2OG-Fe(II) oxygenase superfamily 198 393 IPR027450 -
Gso14g0919 522 MobiDBLite consensus disorder prediction 420 522 - -
Gso14g0919 522 PANTHER RNA DEMETHYLASE ALKBH9B 106 480 - -
Gso14g0919 522 PANTHER RNA DEMETHYLASE ALKBH9B 16 102 - -
Gso14g0919 522 MobiDBLite consensus disorder prediction 505 522 - -
Gso14g0919 522 MobiDBLite consensus disorder prediction 1 22 - -
Gso14g0919 522 MobiDBLite consensus disorder prediction 8 22 - -
Gso14g0919 522 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 299 396 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0919 Gso-Chr14 11279624 11283887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0919 K10767 - gmx:100797674 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0919 14 11279624 11283887 Gso17g1867 17 37424594 37428884 GST