Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1621 ATGCCAAAGATTAATTTGATGGGCACTATGAACAATAATGAAGAACTCGATGGCATTCAGAATTGTGACAATGATGACATTGAAAAAGCTGGACTTGAGGAGCTAGAGGAGCAAAGTGGAGTAGCATCATGGACAAGGCAAATCACAATTCGAGGACTAATAACTAGCTTCATCATTGGTATCGTCTATAGTGTGATTGTGATGAAGCTGAACCTCTCAACAGGGCTTGTTCCGAATCTTAATGTTTCAGCAGCTCTCCTTGGCTTTGTGCTAGTTCGAGCTTGGATCATGCTTCTTGAGAAAGCTAATGTTGTGTCAAAACCTTTCACTAGACAGGAGAATACCATAATTCAGACTTGTGCCGTTGCATGCTATAGCACTGCTTTTGGAGGTGGTTTTGGGTCACACCTCTTGGGTTTGAATAGGAAGACATATGAGCAAGCAGGGGTTGATACAAAGGGGAATACTCCTATCACCAAGGAGCCCGGCATTGGCTGGATGACAGCCTTTCTCTTTGTGACATACTTTGTCGGGTTATCAGCATTGATTCCCCTTAGGAAGATGATGATCATAGACTACAAATTGACTTATCCAACTGGAACTGCTACAGCTGTTCTTATTAATGGGTTCCATACTCCTAAAGGAGATGAGATGGCCAAGAAGCAGGTCCATGGTTTCTTGAAATTCTTCTCATTCAGTTTCCTTTGGTCTTTCTTCCAATGGTTCTATGCTGGTGATGGAGATCAATGTGGATTCTCTCAGTTTCCTACTTTTGGATTGAAAGCGTGGAAAAACTCATTTTACTTTGACTTCAGCATGAATTATGTTGGAGCAGGAATGATTTGTTCCCATCTTGTCAACTTATCCTTGCTTCTTGGTGCCGTGCTCTCTTGGGGTGTTATGTGGCCATTGATCAGAGGACTAAAAGGACAATGGTTCCCTGAGAGTTTATCAGAAAGTAGTATGAAGAGTCTTAATGGTTATAAGGTTTTTATTTCCATTGCCTTAATCCTTGGAGATGGGCTCTACAATTTTGCCAAAATTTTGCTTTTTACTGCTACAAATATCCATGCCAGCATGGAAAGGAGGAATCATAAATCACTTTCAATTTCAGATATCCAGAAGCAGCAGCAGCCTCTTGATCTTAAACGCAATGAAGTGTTTGTAAGAGAAAGAATTCCTATATGGTTAGCATTTACAGGATACATACTGTTCTCTGCCATTTCTATCATAATTATCCCTTTGATTTTCCCTGAAGTGAAGTGGTATTATGTGGTGGTTGCTTATCTGCTTGCACCAACTCTTAGCTTCTGCAACGCTTACAGTGCTGGCTTGACCGACATGAACATGGCCTATAACTATGGGAAAGTGGCTCTCTTTGTGCTAGCTGCCTTAGGCGGGAAAAGCCATGGCGTGGTGGCCGGACTTGTAGGGTGTGGCGTGATCAAATCTCTTGTTTCCACCTCATCCGACTTGATGCAAGATTTCAAGACCGGCCACCTCACCTTCGCTTCCCCTCGGTCGATGCTTCTTTCGCAAGCTATCGGAACAGCGATAGGTTGTGTCCTTGCACCTCTCACATTCTTCCTTTTCTATAAGGCTTTTGATGTAGGGAATCCAGATGGTGATTACAAAGCTCCATATGCCATCATTTATAGAAACATGGCGATTCTAGGTGTGGAAGGCTTTTCTGCACTCCCTCACCATTGCTTGCAGCTCTGTTGTGGGTTCTTTGCATTTGCTGTAGCAACCAACTTGGTGAGAGATTTGAACCCTAAAAACATTGGTAGATGGATTCCACTTCCAATGGCAATGGCTGTACCCTTTGTAGTTGGTGGATACTTTGCAATTGACATGTGTATGGGTAGTTTAGTTGTGTATGCATGGCAAACACTTAAAAGCAAGGAGGCAAGTTTGATGGTACCAGCAGCGGCTTCTGGTTTGATTTGTGGAGATGGATTTTGGATTCTCCCTTCATCTATTCTTGCTTTGTTTAAGGTTCATCCCCCAATCTGTATGAGATTCTTGCCAACCAAGTAG 2040 0.427 MPKINLMGTMNNNEELDGIQNCDNDDIEKAGLEELEEQSGVASWTRQITIRGLITSFIIGIVYSVIVMKLNLSTGLVPNLNVSAALLGFVLVRAWIMLLEKANVVSKPFTRQENTIIQTCAVACYSTAFGGGFGSHLLGLNRKTYEQAGVDTKGNTPITKEPGIGWMTAFLFVTYFVGLSALIPLRKMMIIDYKLTYPTGTATAVLINGFHTPKGDEMAKKQVHGFLKFFSFSFLWSFFQWFYAGDGDQCGFSQFPTFGLKAWKNSFYFDFSMNYVGAGMICSHLVNLSLLLGAVLSWGVMWPLIRGLKGQWFPESLSESSMKSLNGYKVFISIALILGDGLYNFAKILLFTATNIHASMERRNHKSLSISDIQKQQQPLDLKRNEVFVRERIPIWLAFTGYILFSAISIIIIPLIFPEVKWYYVVVAYLLAPTLSFCNAYSAGLTDMNMAYNYGKVALFVLAALGGKSHGVVAGLVGCGVIKSLVSTSSDLMQDFKTGHLTFASPRSMLLSQAIGTAIGCVLAPLTFFLFYKAFDVGNPDGDYKAPYAIIYRNMAILGVEGFSALPHHCLQLCCGFFAFAVATNLVRDLNPKNIGRWIPLPMAMAVPFVVGGYFAIDMCMGSLVVYAWQTLKSKEASLMVPAAASGLICGDGFWILPSSILALFKVHPPICMRFLPTK* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1621 679 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 16 677 IPR045035 GO:0035673
Gso17g1621 679 Pfam OPT oligopeptide transporter protein 47 662 IPR004813 GO:0035673
Gso17g1621 679 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 16 677 - -
Gso17g1621 679 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 44 659 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1621 Gso-Chr17 27391104 27396850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1621 - - gmx:100797196 1316.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1621 17 27391104 27396850 Gso13g0017 13 564440 567786 PCT