Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0017 ATGATGTCCGCACCAGCTAATTTGGAGACGGGGGGAGAAGAGAAGAAATTAGAAATAGAGAAAGAGAAAGAGGTGGAGAGTCAGGTAGAGGTAGCAGATACTGAGTCAAAGCCATGGAAAGAGCAAATAACAGTGAGAGGGTTGGTGGTGAGCATGGTGCTTGGAATCATATACAGCATAATAGCCATGAAGCTCAATCTCTCGGCTGGAATCGTTCCTAACTTCAATGCCTCTGCTGCCCTCCTTGCTTTCTTGTTTGTCCGAAGCTGGAACAAAGTTCTCCAAAAGGCTGGTTTTATCTCCAAACCCTTCACCCGGCAAGAAAACACCATCATACAGACTTGTGCTGTCTCATGCTATAGCATTGCTGTTCATGGAGGATTCGCTTCTTATCTTTTGGGATTAAACAGGAAGACGTATGAGTTGTCTGGAGTTGGGGCTGAGGGTAACAATCCAAATACTGTTAGAGATCCTGGATATGCTTGGATGACTGCCTTCCTTTTTGTGGTTTGCTTTGTTGGCCTCTTTATCTTGATTCCACTCAGAAAGATCATGATAGTTGACCTGAAGTTGACGTTTCCTAGTGGCTTGGCCACAGCTGTTCTCATCAATGGTTTCCACACGCAGGGGGACAAAATGGCCAAGAAGCAAGTTGGTGGGTTCCTGAAGTATTTTTCCATCAGTTTCATGTGGGGGTTTTTCAAGTGGTTCTTCTCAGGGACACAGGGCTGCGGATTCGCGCAGTTTCCTACCTTTGGATTGAAAGCTTGGAAGCAAACATTCTATTTCGATTTTAACATGACTTATGTGGGAGCAGGGATGATTTGCCCCCACCTAGTGAATTTGTCTTTGCTCCTTGGAGCTGTTCTATCTTTTGGAGTGGTATGGCCGCTCATTGATCTTCGTAAGGGAGATTGGTTCCCGACCAATTTAGATGAGAGCAGCATGAAAGCCTTGTATGGCTACAAGGTCTTCCTGACAGTTGCTCTCATCCTCGGTGATGGCTTATACAACTTTGTCAAGATTCTAGTTTCCTCAATCCTTAGCGTACATGAAAAAATTAAGAACCGTAAAAATGTAAGCGGTGATCAGCAGGGGGATAACGGTGAAGAGCTTAAAAAAAAACAAGTGTTTCTGAGGGACAACATATCGATGTGGATTGGAACCGGCGGATACATAGTTTTGTCGGTGGTAGCCATAATTGTAATCCCACAAATGTTTCCTCAGCTGAAGTGGTTCTACGTGGTGGTCGCATACATCTTAGCGCCATCCCTGGCATTCTGTAACGCTTACGGAACGGGCCTCACCGACATGAACATGGCACACAATTACGGCAAAGTGGCACTCTTTGTTATAGCAGCTATGAGCGGGAGAGACAACGGGGTGGTGGCAGGACTCGTAGGTTGTGGTCTGGTTAAATCTGTGGTCTCCGTGGCTTGCACTCTGATGCTCGATTTCAAAACTGCGTATTACACCTGCACTTCTCCTAAAGCAATGTTCATATGCCAATTAGTGGGCACTGCGTTGGGATGTGTAATAGCTCCCCTCAGCTTCTTTCTGTTCTACAAGGCGTTCGATGTGGGGAACCCGCATGGGGAATTCAAGGCTCCCTATGCTCTCATTTACAGAAACATGGCAGTCTTAGGCGTCGAAGGTTTCTCGGCACTTCCCCACCACTGCTTGCAGCTCTGTTACGGGTTCTTCGCTTTCGCGGTGGCTGTGAACATGGTCAGAGACCTCTCCCCCAAGAAGATTGGGAAATGGATGCCTTTGCCCATGGTAATGGCGATACCCTTCCTTGTTGGTGCTTACTTTGCCATTGATATGGCCCTTGGGACTTTGGTTGTTTACGTGTGGCACAAGCTTAACTCCAAGAAGGCTGAGGCCATGATTCCAGCAACTGCCTCTGGACTCATTTGTGGGGAAGGCCTCTGGGCTCTCCCTGCTTCCATTCTCGCCCTTTCCAAAATTAAACCTCCTATCTGCATGAATTTTCTTGCTTCCTAG 2007 0.4699 MMSAPANLETGGEEKKLEIEKEKEVESQVEVADTESKPWKEQITVRGLVVSMVLGIIYSIIAMKLNLSAGIVPNFNASAALLAFLFVRSWNKVLQKAGFISKPFTRQENTIIQTCAVSCYSIAVHGGFASYLLGLNRKTYELSGVGAEGNNPNTVRDPGYAWMTAFLFVVCFVGLFILIPLRKIMIVDLKLTFPSGLATAVLINGFHTQGDKMAKKQVGGFLKYFSISFMWGFFKWFFSGTQGCGFAQFPTFGLKAWKQTFYFDFNMTYVGAGMICPHLVNLSLLLGAVLSFGVVWPLIDLRKGDWFPTNLDESSMKALYGYKVFLTVALILGDGLYNFVKILVSSILSVHEKIKNRKNVSGDQQGDNGEELKKKQVFLRDNISMWIGTGGYIVLSVVAIIVIPQMFPQLKWFYVVVAYILAPSLAFCNAYGTGLTDMNMAHNYGKVALFVIAAMSGRDNGVVAGLVGCGLVKSVVSVACTLMLDFKTAYYTCTSPKAMFICQLVGTALGCVIAPLSFFLFYKAFDVGNPHGEFKAPYALIYRNMAVLGVEGFSALPHHCLQLCYGFFAFAVAVNMVRDLSPKKIGKWMPLPMVMAIPFLVGAYFAIDMALGTLVVYVWHKLNSKKAEAMIPATASGLICGEGLWALPASILALSKIKPPICMNFLAS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0017 668 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 29 654 IPR004813 GO:0035673
Gso13g0017 668 Pfam OPT oligopeptide transporter protein 42 652 IPR004813 GO:0035673
Gso13g0017 668 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL1 13 667 - -
Gso13g0017 668 MobiDBLite consensus disorder prediction 1 21 - -
Gso13g0017 668 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 13 667 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0017 Gso-Chr13 564440 567786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0017 - - gmx:100807763 1283.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1621 17 27391104 27396850 Gso13g0017 13 564440 567786 PCT