LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g0987	ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTTTGTGAACACATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCCAAGTATGGTGGCCATGACCCTTCAACCTACAGATACAACAAGACTGAAGCATTAGCAGGGGACTGGTTCTGCAACTGTGGAGCTCACAACTATGCCAGTAGATCAAGCTGCTATAGATGTGGTGCAATCAAAGACTATTACTCTTCTGGAGAATATGGATCTGACACTTTCCCCCCTGGATGGAAGAATGGAGACTGGCTTTGCCCAAGAATCGGCTGTGGAGTACATAATTATGCTAGCAGGACAGAATGCTTCAAATGCAAAGTGCCAAGGGATTTAGACTGA	375	0.4587	MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGHDPSTYRYNKTEALAGDWFCNCGAHNYASRSSCYRCGAIKDYYSSGEYGSDTFPPGWKNGDWLCPRIGCGVHNYASRTECFKCKVPRDLD*	125

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso17g0987	124	PANTHER	ZINC FINGER PROTEIN	1	123	-	-
	Gso17g0987	124	Pfam	Zn-finger in Ran binding protein and others	49	72	IPR001876	-
	Gso17g0987	124	Pfam	Zn-finger in Ran binding protein and others	92	121	IPR001876	-
	Gso17g0987	124	Pfam	Zn-finger in Ran binding protein and others	6	32	IPR001876	-
	Gso17g0987	124	ProSitePatterns	Zinc finger RanBP2-type signature.	8	27	IPR001876	-
	Gso17g0987	124	ProSiteProfiles	Zinc finger RanBP2 type profile.	4	33	IPR001876	-
	Gso17g0987	124	PANTHER	ZINC FINGER, RANBP2-TYPE-RELATED	1	123	-	-
	Gso17g0987	124	ProSiteProfiles	Zinc finger RanBP2 type profile.	92	123	IPR001876	-
	Gso17g0987	124	SUPERFAMILY	Ran binding protein zinc finger-like	47	76	IPR036443	-
	Gso17g0987	124	SMART	zf_4	6	30	IPR001876	-
	Gso17g0987	124	SMART	zf_4	94	120	IPR001876	-
	Gso17g0987	124	SMART	zf_4	50	73	IPR001876	-
	Gso17g0987	124	ProSitePatterns	Zinc finger RanBP2-type signature.	96	117	IPR001876	-
	Gso17g0987	124	SUPERFAMILY	Ran binding protein zinc finger-like	86	122	IPR036443	-
	Gso17g0987	124	Gene3D	-	41	75	-	-
	Gso17g0987	124	Gene3D	-	1	34	-	-
	Gso17g0987	124	Gene3D	-	86	122	-	-
	Gso17g0987	124	SUPERFAMILY	Ran binding protein zinc finger-like	2	34	IPR036443	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g0987	Gso-Chr17	9241821	9243789	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso17g0987	-		-	gmx:100794904	292.737

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso17g0987	17	9241821	9243789	Gso17g0987	17	9241821	9243789	ECH
	Gso17g0987	17	9241821	9243789	Gso6g1832	6	22682585	22684658	PCT