LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g0986	ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTTTGCGAGCATATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCCAAGTATGGGGGTCCTGACCCTTCAACCTACAGATACAACAGGACTGAAGCTTTAGCAGGGGACTGGTTTTGCAACTGTGGAGCTCACAACTTCGCAAGTCGATCAAACTGCTTCAGATGTGGCTCAATGAAAGATGATTACTCTTCAGGATATGGCAACAACTCTGGAGGATATGGATCTGACACTTTCCCCCCAGGATGGAAGACTGGAGACTGGCTTTGCCCAAGACATGGATGTGGAGTGCATAACTATGCCAGCAGGACAGAATGCTATATATGCAAAATGCCAAGGGATTATGGTGGTGCAGACTGA	402	0.4751	MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALAGDWFCNCGAHNFASRSNCFRCGSMKDDYSSGYGNNSGGYGSDTFPPGWKTGDWLCPRHGCGVHNYASRTECYICKMPRDYGGAD*	134

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso17g0986	133	SUPERFAMILY	Ran binding protein zinc finger-like	46	76	IPR036443	-
	Gso17g0986	133	PANTHER	ZINC FINGER, RANBP2-TYPE-RELATED	1	130	-	-
	Gso17g0986	133	Pfam	Zn-finger in Ran binding protein and others	6	32	IPR001876	-
	Gso17g0986	133	Pfam	Zn-finger in Ran binding protein and others	49	74	IPR001876	-
	Gso17g0986	133	Pfam	Zn-finger in Ran binding protein and others	98	126	IPR001876	-
	Gso17g0986	133	ProSiteProfiles	Zinc finger RanBP2 type profile.	98	129	IPR001876	-
	Gso17g0986	133	Gene3D	-	93	129	-	-
	Gso17g0986	133	Gene3D	-	42	76	-	-
	Gso17g0986	133	Gene3D	-	1	35	-	-
	Gso17g0986	133	SUPERFAMILY	Ran binding protein zinc finger-like	3	34	IPR036443	-
	Gso17g0986	133	SMART	zf_4	100	126	IPR001876	-
	Gso17g0986	133	SMART	zf_4	6	30	IPR001876	-
	Gso17g0986	133	SMART	zf_4	50	73	IPR001876	-
	Gso17g0986	133	ProSitePatterns	Zinc finger RanBP2-type signature.	8	27	IPR001876	-
	Gso17g0986	133	ProSiteProfiles	Zinc finger RanBP2 type profile.	4	33	IPR001876	-
	Gso17g0986	133	SUPERFAMILY	Ran binding protein zinc finger-like	92	129	IPR036443	-
	Gso17g0986	133	ProSiteProfiles	Zinc finger RanBP2 type profile.	48	76	IPR001876	-
	Gso17g0986	133	PANTHER	ZINC FINGER PROTEIN	1	130	-	-
	Gso17g0986	133	ProSitePatterns	Zinc finger RanBP2-type signature.	102	123	IPR001876	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g0986	Gso-Chr17	9232596	9234689	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso17g0986	-		-	gmx:100794378	297.745

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso6g1832	6	22682585	22684658	Gso17g0986	17	9232596	9234689	PCT