Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0659 ATGGAGCGTGAAAACGAGAACAGCGTCAACGCTCAACGCCGCGTGGGTTTACTCTACGACGAGACTATGTGTAAGCACCACACACCAGACGACGAGGACCATCCCGAGAACCCTAATCGCATCAGAGCCATTTGGAACAGACTCCAAAGCGCCGGCGTTCTCCAACGATGCGTGATTTTGGAGGCCAAAGAAGCTGAAGACAAACATCTACTGTTGGTGCATTCTATAAACCATGTGAATCTGATTAAGAACATCAGCTCAAAGCAGTTCAATTCGCGGAGGCATAAGATTGCCTCAAAATTGGGTTCCATATACTTTAACGAAGGTTCATCAGAGGCTGCGTACCTTGCCGCTGGCTCTGCAGTAGAGGTTGTTAAAAGAGTGGCAAGCAGGGAATTGGATTCTGCTGTTGCCATTGTTAGGCCTCCGGGTCATCATGCAGAACAACAAGAAGCTATGGGATTTTGTCTGTTCAACAATGTGGCAGTTGCTGCAAGATATCTCTTAGACGAAAGACCAGAATTAGGTGTGAAGAAAATATTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCGAGTTTTATTCTTTTCTGTTCACAGGCATGAGTTTGGGAGTTTTTATCCAGCTAATGATGATGGATTTTATACCATGATTGGAGAAGGAGCAGGTGCTGGATATAATATAAATGTCCCCTGGGAGAATGGGCGATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATCTTGCTTCCTGTTGCTAAAGAATTTAATCCAGATATAATTATAGTTTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGAGGATGCCTTGTCACACCATTTGGTTATTCTGTTCTGTTGGAAAAGTTGATGAATTTTGCTGAAGGTAGGATTGTATTGATTCTAGAAGGTGGATATAATCTTGATTCCATCTCAAAATCAATGCATGCCTGCTTGGAAGTTTTGCTAGCAGACCAGCCTGTTATTGGATCTGCAGAGGCCTATCCATTTGAATCTACATGGCGTGTGATTCAAGCGGTTCGCCAGGTTTTAAGTCCCTTTTGGCCTACACTTGCACGTGAATTACCGCACAAGTTAATCTCACCAATGGCACCACCTCCGTATACTCTTATCTCGAGCTCTGACACTGAGGCTGAGGATGATAAGGGTGCACTAAGTTCAGAAAATCTTGTTGAACTTCTTGAGGATGTCATAAAACCACTTTCTGAACTGAAAGTTGATGCTGATAAAGAGACTGATGTTTCTAGTACTTGGCGATCGGAATTGTCAAATGTTTATATATGGTATGCCTCATATGGATCAAATATGTGGAAAGCAATATTAAATTGCCACCTAGCAGGTGGACAGGTGGAAGGCATGAAGAAGGACTGTTCTGGTTCAGTGAATAGAACTCTGCCAAAAGCGATCCTGTGGAAAACTTTCCCTTGTCATATATTTTTCGGTTGTGATTCATCACATTCATGGGGTGTGGGAGGTGTTGCATTTCTTAATCCTGAGAAAAACTTTCAGCACAACACCTACATGTGCCTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTGTTTCAGGAAAATGCTTTAAGCCTTGATGCAGGCTCTCCTTTATTTGATATAACTACCGTGAATGCTATCTCTAACAAGGAGTTCAACTCTCTGGAGGTTGTCAAGGGTGCTTGGTATGGCAATGTTGTCTACTTAGGAAAGGAGCAGGATATTCCAGTAGTTACCATGACGTGTTCACTTCTTGATATTGGAAATTTCAAATCTGGGAAGCTACCCTTACGTGCCCCTAATAAAGCATATGCCAACACCTTAATAAAAGGGTTGGTTGATGGAGAACAGCTTTCAGAGGTGGAAGCCATCGCTTACATAGAAGGTGCTGCTAAATCATTGTAA 1959 0.4267 MERENENSVNAQRRVGLLYDETMCKHHTPDDEDHPENPNRIRAIWNRLQSAGVLQRCVILEAKEAEDKHLLLVHSINHVNLIKNISSKQFNSRRHKIASKLGSIYFNEGSSEAAYLAAGSAVEVVKRVASRELDSAVAIVRPPGHHAEQQEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCLVTPFGYSVLLEKLMNFAEGRIVLILEGGYNLDSISKSMHACLEVLLADQPVIGSAEAYPFESTWRVIQAVRQVLSPFWPTLARELPHKLISPMAPPPYTLISSSDTEAEDDKGALSSENLVELLEDVIKPLSELKVDADKETDVSSTWRSELSNVYIWYASYGSNMWKAILNCHLAGGQVEGMKKDCSGSVNRTLPKAILWKTFPCHIFFGCDSSHSWGVGGVAFLNPEKNFQHNTYMCLYKISLEQFNDILFQENALSLDAGSPLFDITTVNAISNKEFNSLEVVKGAWYGNVVYLGKEQDIPVVTMTCSLLDIGNFKSGKLPLRAPNKAYANTLIKGLVDGEQLSEVEAIAYIEGAAKSL* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0659 652 PANTHER HISTONE DEACETYLASE 3 605 - -
Gso17g0659 652 Gene3D Histone deacetylase domain 7 382 IPR037138 -
Gso17g0659 652 Gene3D - 435 650 - -
Gso17g0659 652 Pfam Histone deacetylase domain 34 334 IPR023801 -
Gso17g0659 652 PRINTS Histone deacetylase superfamily signature 142 165 IPR000286 -
Gso17g0659 652 PRINTS Histone deacetylase superfamily signature 269 279 IPR000286 -
Gso17g0659 652 SUPERFAMILY Arginase/deacetylase 12 369 IPR023696 -
Gso17g0659 652 PANTHER BNAA09G05590D PROTEIN 3 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0659 Gso-Chr17 6103309 6109699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0659 K11406 - gmx:100807829 1327.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0176 5 1888998 1895507 Gso17g0659 17 6103309 6109699 GST
Gso17g0659 17 6103309 6109699 Gso4g1416 4 41741503 41743351 PCT
Gso17g0659 17 6103309 6109699 Gso6g1636 6 17335922 17337677 PCT