Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0507 ATGGGATGTTCTCAATCAAAGTTGGATGATGAAGAGGCAGTCAAGCTCTGCAAAGATAGAAAACAATTCATCAAAAAGGCTGTTGAGCAAAGAGCTCAATATGCTACTGGACATGTAGCATACATTCAGTCTCTGAAAAGGGTGTCAGCTGCACTGCTAGATTACTTCAAAGCCAATGAGTTGCGTGAGTTGTCATTGGATTCATTCATAACTCCACCTTTCACACCTGTGAAGAAAACTAGTCCTGCTTTCATTCCCATTTCATCAAAATCCTTCACCCCAACAACAATTGAGTTTGGTCCCAAGACAACTTTGAAGGTGAATTACCTAAGGCCGAGTGGTAATCCGGCGATTTCTGTCGAGGAAAGGCCTCGATCGCCTGAAATGGTTCGGGTTGAAAGTTATTCTCCAATGCACCAGTTTGGCATTGAGGGTTTTTTTCCAATGCAATCCTTACCTGTGAATCCCTCAATTTATTCTCCCCATAACAGGCCTAATATCCCTCCACCTTCACCTCAGTCTTCCCAATGGGATTCCTTTTGGAATCCTTTTTCATCATTGGACTATTATGGTTACCCCACCCAAAGTAGCCTTGATTGGACCGGAACGGATGATGAGATCAGAGGACTGAGGAAGGTTCGAGAAGAAGAGGGAATACCAGACCTGGAAGAAGATGAAACTGAGCAAGAAGAATTTGCTGTAAAGAAAAATGTAGCAGAAGAAAGAGCCAAAATTGATGTAAACCCCTCCAAAGAAGAAGTCACGGTTACAGATGTTGATGAACATGAGGAAGAAGAAGAAGAGGGAACAGATGCTGAAACTGGAACAGTGAATGAAGTCACAGACTCACAAGCCAATGGCATTGAATGTTTTCAAGTATCTAAAGCTCAAACTACGGGTCAGGAAATGGAAACTGGTAATCAAGAAGCAAAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACCGAAGGCCCACAAGCATGGCTGAAGTGATCAAGGATCTTGAAGCTCAATTCACAATAATCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCTCAATATTTATCAACATCTAATGAACTGTCAGCTTCAAAATTATTGAACCCAGTGGCGCTTTTCCGCTCAGCTTCATTGCACTCATCCACATCAAGATTCTTAATGAATTCTTCAAACACTAGGGATGAGGATTACGAAGGCCCCGATGATCCATCAGAGGAACATTGTTTGTTTTCTGTTAGTCATCAGTCCACACTAGACAGGTTATATGAATGGGAGAAGAAGCTCTACGAGGAAGTCAAGTCAGGAGAACGTGTTCGCATTGCATATGAGAAGAAATGTCAGCAACTCAGGAATCATGATATAAATGGAGAGGAACCTTCTTCTCTTGATAAAACAAGAGCAGCCGTTAGAGATTTACATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAGGAGAATTGAAACTCTAAGGGATGGAGAGTTGCATCCTCAGCTTCTTGAATTGGTGCAAGGGCTTGCCAAGATGTGGAAAGTGATGGCAGAATGTCACCAGACACAGAAGAGAACCCTAGATGAAGCCAAGATTCTTCTAGTTGACAATGATGCCAGAAAACAGTGTGCCACATCACGAACTGATCCTCAAAGGCTTGCTCATTCTGCCTCCAATCTTGAAACCGAATTGAGGCATTGGCGAAACACCTTTGAGTCATGGATCACTTCTCAAAGATCCTATATTAATGCTCTAACTGGCTGGCTTCTAAGATGTGTGAGATGTGAACATGATCCATCAAAGCTAGCATGCTCTCCTCGCAGGTCCAGTGGCACTCATCCACTATTTGGACTTTGTGTTCAATGGTCAAGGCATCTAGACGCCCTCCAAGAAACAGCAGTGCTTGATGGCATAGACTTTTTTGCAGCTGGCATGGGGTCCCTCTATGCACAACAGTTAAGAGAAGAGACTCGACGAAATCCAGATGGATCAAAAGAACATGGTGAGAATATGGAAATGGTGGAAGTTGGTCAGGTTGAAGAGGTAATGAATACTGAGAAATTGGCTGAAGTTGCTATCAAGGTGCTTTGTGCTGGTATGTCAATTGCTATGAGCTCAATGGCAGAGTTTGCTGTTGATTATGCTGAGGGATACACTGAACTTGCTAAGAAGTGGGAGAAAGTGAACTTGCAGCAGATTTCTTGTGGGGCTGGAACATAG 2238 0.429 MGCSQSKLDDEEAVKLCKDRKQFIKKAVEQRAQYATGHVAYIQSLKRVSAALLDYFKANELRELSLDSFITPPFTPVKKTSPAFIPISSKSFTPTTIEFGPKTTLKVNYLRPSGNPAISVEERPRSPEMVRVESYSPMHQFGIEGFFPMQSLPVNPSIYSPHNRPNIPPPSPQSSQWDSFWNPFSSLDYYGYPTQSSLDWTGTDDEIRGLRKVREEEGIPDLEEDETEQEEFAVKKNVAEERAKIDVNPSKEEVTVTDVDEHEEEEEEGTDAETGTVNEVTDSQANGIECFQVSKAQTTGQEMETGNQEAKEETPGFTVYVNRRPTSMAEVIKDLEAQFTIICNAANDVSALLEAKKAQYLSTSNELSASKLLNPVALFRSASLHSSTSRFLMNSSNTRDEDYEGPDDPSEEHCLFSVSHQSTLDRLYEWEKKLYEEVKSGERVRIAYEKKCQQLRNHDINGEEPSSLDKTRAAVRDLHTQITVSIHSVEAISRRIETLRDGELHPQLLELVQGLAKMWKVMAECHQTQKRTLDEAKILLVDNDARKQCATSRTDPQRLAHSASNLETELRHWRNTFESWITSQRSYINALTGWLLRCVRCEHDPSKLACSPRRSSGTHPLFGLCVQWSRHLDALQETAVLDGIDFFAAGMGSLYAQQLREETRRNPDGSKEHGENMEMVEVGQVEEVMNTEKLAEVAIKVLCAGMSIAMSSMAEFAVDYAEGYTELAKKWEKVNLQQISCGAGT* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0507 745 PANTHER UNCHARACTERIZED 1 737 - -
Gso17g0507 745 Pfam Protein of unknown function (DUF632) 328 651 IPR006867 -
Gso17g0507 745 MobiDBLite consensus disorder prediction 258 273 - -
Gso17g0507 745 PANTHER DUF630 FAMILY PROTEIN 1 737 - -
Gso17g0507 745 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Gso17g0507 745 MobiDBLite consensus disorder prediction 252 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0507 Gso-Chr17 4632062 4636932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0507 1 681 Acyl Lipid Metabolism Gene Families AT2G27090 28.360 3.68e-63 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0507 - - gmx:100776480 1385.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0507 17 4632062 4636932 Gso17g0507 17 4632062 4636932 ECH
Gso13g0714 13 21384500 21389326 Gso17g0507 17 4632062 4636932 GST
Gso17g0507 17 4632062 4636932 Gso15g1350 15 14180346 14185449 PCT
Gso17g0507 17 4632062 4636932 Gso9g0489 9 5196923 5202634 PCT
Gso15g1350 15 14180346 14185449 Gso17g0507 17 4632062 4636932 PCT
Gso9g0489 9 5196923 5202634 Gso17g0507 17 4632062 4636932 PCT