Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1350 ATGGGATGTTCACATTCAAGGTTGGATGATGAAGAGGCAGTTCGACTTTGTAAAGACAGAAAGAAGTTCATCAAACAAGCTGTCGAACAAAGAACTCGGTTCGCCACTGGACACATAGCCTACATAGAATCTCTGAAAAGGGTTTCAGCAGCACTTCGCGATTACATTGAAGGCGATGAGCCTCGCGAGTTTTCATTAGACACGGTCATCACCCCACCTTTCACACCTGTGAAGAAGAAAACTGGCCCAGGATTCATTCCCATATCAGCAAAACCCTTTGCTACAACAGGGTCAATTGAGTTTGGAATTGGACCAAACTCTACTTTGAAAGTGAATTACCTTAGGCCTGGTGGTAACCCAGCAATTTCAGTTGAAGAAAGGCCTCAATCCCCAGAAAGGGTTCGGGTTGAGACATATTATTCTCCAATGCAGCACTATGGCATTAATGGATTTTTCAACATGCAATCCTCACCGGTGAATCCCTCAATTTTTGCTTACTCTCCCAATAATAGGCCTGTTATCCCTCCACCTTCACCTCAAGCTTCCCAATGGGATTTCTTTTGGAACCCTTTTTCATCATTGGACAGTTATGGTTACCCTTCAAGAAGTAGCATTGAGCAAACTGCAATGGATGATGAATACAGAGGACTTAGGCAGGTTAGAGAAGAAGAGGGAATACCAGACCTGGAAGAAGATGAAACTGAACATGAAGATTGTGTTGGAAAGAGAAATGTAGCAGAAGAAAGAACTACACACGATATAAATGCTTCCAAAGAAGAAGTTATTGTTGAAGATGTTGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAAGAAACAGACATAGAAGATGAAACTAAAACTGAGCATGAGGCCAAAGATTCACAAGCTCATGGTAGTGCAAGTTTTGAAGTAGCAAAAGCTCAAGCTGCTGGTCATATTGAATCCAGACATAGGGAAATGACAATTGGTAAACAAGAAGCTGTGGAAGAAACACCAGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATCAATGATCTTGAAACTCAATTCACAGTTGTCTGCAATGCAGCCAATGATGTTGCAGCATTGCTAGAGGCCAAGAAATCTCAGTATTTATTGACATCTAATGAGCTTTCAGCATCTAAGTTGTTGAACCCAGTAGCTTTGCTCCGATCAGCTTCTTCACGCTCTTCTTCATCAAGATTTTTGATGAATTGTTCAAGCACTAGCACGGAAGGTTGTGAGGGCACTAAGGATCTCTCAGCAGAACATTGTATGTTATCCGGTAGTCACCACTCCACATTGGATAGATTAAATACATGGGAGAAGAAGCTCTATGAGGAAGTCAGGTCTGGAGAACGTGTCCGAATTGCATATGAGAAGAAATACAAGCAACTCAGGAACCTTGATGTAAAAGGAGAGGACCCCTCTTGTGCAGATAAAATAAGAGCAACCATTAGAGAACTAGATACTCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCAAGGAGAATCGAAACTTTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGGTGCACGGGCTGGAAAGGATGTGGAAAGTGATGGCAGAATGCCATCAGACACAGAAGAGAACCTTAGATGAGGCTAAGATTCTTCTAGCTGGCACTTCTTCTAAATCACGTGCCAGAAAACAGTCTTCCATGTCAATGACTGATCCAAACAGGCTGGCGCGTTCAGCCTCCAATCTTGAATTCGAGTTAAGGAACTGGAGAAATGCCTTTGAGTCATGGATCACTTCTCAAAGATCCTACATTCATGCACTAACTGGTTGGCTTCTTCGGTGCATGAGATCCGAGCCTGACGTATCAAAGTTACCTTGCTCTCCTCGCAGGTCCAGCGGCACTCACCCTTTGTTTGGACTGTGTGTTCAGTGGTCAAGGCGCCTAGATGCCATACAAGAAAAGGCAGTGCTTGATGGCTTAGACTTCTTTGCTGCTGGAATGGGCTCCCTCTATGCACATCAGTTAAGAGAAGATTCTAGCAGAATCTCATTTGGATCAAAGCAAAGCAATGGAAATATGGAAATGGTGGAAGTTGGTGAGGTGGAAGAGGTAATGGCTCCAGAGAAACTGGCTGAAGTTGCTATTAAAGTGCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCAGAGTTTGCTTTGGATTCTGCTGAAGGGTACAATGAAGTTGTTAAGCAATGGGACAATGGGAAGTGTCAAAATACTACTTCTAGTGAGACTAGAACATAA 2322 0.4311 MGCSHSRLDDEEAVRLCKDRKKFIKQAVEQRTRFATGHIAYIESLKRVSAALRDYIEGDEPREFSLDTVITPPFTPVKKKTGPGFIPISAKPFATTGSIEFGIGPNSTLKVNYLRPGGNPAISVEERPQSPERVRVETYYSPMQHYGINGFFNMQSSPVNPSIFAYSPNNRPVIPPPSPQASQWDFFWNPFSSLDSYGYPSRSSIEQTAMDDEYRGLRQVREEEGIPDLEEDETEHEDCVGKRNVAEERTTHDINASKEEVIVEDVDDDDDEEEEEEEEEEEEETDIEDETKTEHEAKDSQAHGSASFEVAKAQAAGHIESRHREMTIGKQEAVEETPGFTVYVNRRPTSMAEVINDLETQFTVVCNAANDVAALLEAKKSQYLLTSNELSASKLLNPVALLRSASSRSSSSRFLMNCSSTSTEGCEGTKDLSAEHCMLSGSHHSTLDRLNTWEKKLYEEVRSGERVRIAYEKKYKQLRNLDVKGEDPSCADKIRATIRELDTQITVSIHSVEAISRRIETLRDEELHPQLLELVHGLERMWKVMAECHQTQKRTLDEAKILLAGTSSKSRARKQSSMSMTDPNRLARSASNLEFELRNWRNAFESWITSQRSYIHALTGWLLRCMRSEPDVSKLPCSPRRSSGTHPLFGLCVQWSRRLDAIQEKAVLDGLDFFAAGMGSLYAHQLREDSSRISFGSKQSNGNMEMVEVGEVEEVMAPEKLAEVAIKVLCAGMSVAISSLAEFALDSAEGYNEVVKQWDNGKCQNTTSSETRT* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1350 773 PANTHER DUF630 FAMILY PROTEIN 1 773 - -
Gso15g1350 773 MobiDBLite consensus disorder prediction 236 261 - -
Gso15g1350 773 PANTHER UNCHARACTERIZED 1 773 - -
Gso15g1350 773 MobiDBLite consensus disorder prediction 224 320 - -
Gso15g1350 773 Coils Coil 263 293 - -
Gso15g1350 773 MobiDBLite consensus disorder prediction 262 290 - -
Gso15g1350 773 Pfam Protein of unknown function (DUF632) 351 678 IPR006867 -
Gso15g1350 773 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1350 Gso-Chr15 14180346 14185449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1350 1 232 Acyl Lipid Metabolism Gene Families AT2G27090 27.731 1.24e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1350 - - gmx:100780704 1428.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1350 15 14180346 14185449 Gso9g0489 9 5196923 5202634 GST
Gso13g0714 13 21384500 21389326 Gso15g1350 15 14180346 14185449 PCT
Gso17g0507 17 4632062 4636932 Gso15g1350 15 14180346 14185449 PCT
Gso15g1350 15 14180346 14185449 Gso13g0714 13 21384500 21389326 PCT
Gso15g1350 15 14180346 14185449 Gso17g0507 17 4632062 4636932 PCT