Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0502 ATGGAGACAAAAATAGTGCTCGCAAGGCCATTCTCGCTAGAGAGCGAATCAGACCCAGATGCAAATTATAAAGCTCCAAATATTTTGCGGCGCATATTAAGTCTCTTCAGTAATGTGCGCCCAGGATCTGATGTCTCTTGCTTCAAGCTGCCACCTGTGTTCAACATGCCGAAGTCAGAGCTTCAGTGCTATGGGGAGTGTGTATATTCCACAGCGTTAGACATGCTAAGCAACATCAACAGAGGCAACACACCATTGGATAGACTCATATCTGTTGTTGCATGGAGCATTTCTACCGTACGCCCCCTGTGGTTTGGTGTTGCTCCCTACAATCCCACTCTTGGTGAGACTCATCATGTTTCCAAAGGAAACCTCAATGTCTTACTCGAACAGGTTTCACATCACCCTCCGGTATCTGCTCTCCATGCCACCGATGACAAGGAAAACATAGAAATGATATGGTGCCACTCTACTGTTCCAAAATTCACAGGTACTTCAGTTGAAGCTCACGTGCATGGCAAACGGCAGCTGAAGCTCCACAATCATGGAGAGACCTATGAAATGAATGCTCCTAATCTCCTTATCAGAATTTTTCCAATCCCTGGGAATGATAATGTTGGCGATGTCAGTATCCGGTGCCTAGAAACTAACCTTGTGGCAGAATTAAGCTACATAAGCCAATCTTTCTTTCGGTTTGGGACAAATCGGAGACAGATTAAAGGAAAGATCATTGATTCATTGTCTGCCAAGCTTCTGTATAAAATTGAAGGTCATTGGGATAGTACTGTAACAGTGAAGAATACAGACAATGCAGAAGTAAGAGTGATATACGATGCAAATGAAGTTATTTCAGGACTCCAAGCTCCTATTGTCATGGATCCGGAGAGTGTGTGGCCAACAGAAACCACTCTTGTTTGGAGTGAGTTGAGCCAAGCCATCGTGAACAAAGACTGGGAAAAAGCAACAGAAGCAAAGAAAACAGTGGAGGAAAGACAAAGGGAGCTCCAAAGAGAAAGAGAGTCAAAAGGGAAAACTTGGATTCCTAAACACTTTAGAGTGTCTTATAGCAAAGAAGAGGGTTGGGACTGTTCACCAATTCAAAAGTCAGTCCCAAACGCCCCTATCGTCACCTTGTAA 1137 0.4398 METKIVLARPFSLESESDPDANYKAPNILRRILSLFSNVRPGSDVSCFKLPPVFNMPKSELQCYGECVYSTALDMLSNINRGNTPLDRLISVVAWSISTVRPLWFGVAPYNPTLGETHHVSKGNLNVLLEQVSHHPPVSALHATDDKENIEMIWCHSTVPKFTGTSVEAHVHGKRQLKLHNHGETYEMNAPNLLIRIFPIPGNDNVGDVSIRCLETNLVAELSYISQSFFRFGTNRRQIKGKIIDSLSAKLLYKIEGHWDSTVTVKNTDNAEVRVIYDANEVISGLQAPIVMDPESVWPTETTLVWSELSQAIVNKDWEKATEAKKTVEERQRELQRERESKGKTWIPKHFRVSYSKEEGWDCSPIQKSVPNAPIVTL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0502 378 ProSitePatterns Oxysterol-binding protein family signature. 130 140 IPR018494 -
Gso17g0502 378 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 376 IPR000648 GO:0008289
Gso17g0502 378 SUPERFAMILY Oxysterol-binding protein-like 31 363 IPR037239 -
Gso17g0502 378 Pfam Oxysterol-binding protein 35 362 IPR000648 GO:0008289
Gso17g0502 378 Coils Coil 318 341 - -
Gso17g0502 378 Gene3D - 298 372 - -
Gso17g0502 378 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 376 - -
Gso17g0502 378 Gene3D - 111 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0502 Gso-Chr17 4562527 4565702 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0502 K22285 - gmx:100819769 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0719 13 21474115 21479401 Gso17g0502 17 4562527 4565702 GST
Gso17g0502 17 4562527 4565702 Gso15g1356 15 14345389 14352266 PCT
Gso17g0502 17 4562527 4565702 Gso9g0498 9 5331230 5337577 PCT
Gso15g1356 15 14345389 14352266 Gso17g0502 17 4562527 4565702 PCT
Gso9g0498 9 5331230 5337577 Gso17g0502 17 4562527 4565702 PCT