Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0719 ATGAAGGTAACCAAAGGGAAGGAAACTAAAATTGTTCTGACAAAACCCTTCCAATTGGAAGGTGAATCAGATTTAGAACCGTCTTATAGAGCTCCCAATCTCCTACATCGCTTGTTAAGTTTACTCAAGAACGTGCGGCCAGGATCAGATCTCACACACTTCCAACTGCCAGCTGTGTTTAACTTCCCAAAATCTCAACTTCAATGCTATGGTGAATCAGTGTACTGCACATCTTCAAACTTGCTGAGCAAATGCAACAATGGGCAGAGTCCACTGGACAGGTTCACATCAGTAGTAGCATGGAGCATATCTACCACACGCCCCACGTCTTTTGGTGTTGCTCCTTATAATCCCACTCTTGGAGAGACCCACCATGTTTCCAAGGGCAATCTCAACGTCCTAGTTGAGCAGGTATCAGTCAACCCTCCAGTATCTGCCCTCCATGCAACAGATGAGAAGGAAAACATTGAGATGATATGGTCCCAGCAACCTGTTCCAAAGTTTCGGGGTACATCTATTGAAGCTCAAGTGCATGGTAAACGTCAGCTGAAGCTCCTAAATCATGGAGAAACATATGAAATGAATTGTCCTCACCTTTCAATTAGAATTCTTCCGGTTCCTGGGATTGATTGGGTTGGCAATGTTAATATAAGGTGCCCAGAGACAGGTCTGGTAGCTGAAATATCATACAGATCAAGCCATTCTTTTCTAGGATTTGGGGGAAGTCGTAAATTTATCAAAGGGAAAATCCTTGACTCATCATTATTCAAAGTTCTCTATGAAGTTGATGGTCATTGGGATAAGACAGTTAAAGTGAAGGATACAAATAGTGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTTATTTCAGGGCTCAAAACTCCTATTATCAAGGATGCGGAGAGTGTGTGGCCAACCGAATCAGCCCTTGTTTGGAGTGAGTTGAGCCAAGCCATTATGAACAAAGATTGGGAAAGAGCAAGAGAAGCAAAACAAGATGTGGAAGAAAGACAGAGGAAGGTGTTGAGAGACAGAGCCATGAAAGGAGAAACTTGGTTTCCTAAGAATTTTAGGGTGTCCTACGGTAAAGACACGTGGGAATGGGACTGTTCACCAACTCATAAATGGGTCCCTGAGGCCCCCATCATAGCTCAATAA 1161 0.4315 MKVTKGKETKIVLTKPFQLEGESDLEPSYRAPNLLHRLLSLLKNVRPGSDLTHFQLPAVFNFPKSQLQCYGESVYCTSSNLLSKCNNGQSPLDRFTSVVAWSISTTRPTSFGVAPYNPTLGETHHVSKGNLNVLVEQVSVNPPVSALHATDEKENIEMIWSQQPVPKFRGTSIEAQVHGKRQLKLLNHGETYEMNCPHLSIRILPVPGIDWVGNVNIRCPETGLVAEISYRSSHSFLGFGGSRKFIKGKILDSSLFKVLYEVDGHWDKTVKVKDTNSGEVRVIYDAKEVISGLKTPIIKDAESVWPTESALVWSELSQAIMNKDWERAREAKQDVEERQRKVLRDRAMKGETWFPKNFRVSYGKDTWEWDCSPTHKWVPEAPIIAQ* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0719 386 Pfam Oxysterol-binding protein 40 315 IPR000648 GO:0008289
Gso13g0719 386 Gene3D - 302 350 - -
Gso13g0719 386 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 384 IPR000648 GO:0008289
Gso13g0719 386 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 384 - -
Gso13g0719 386 Gene3D - 117 295 - -
Gso13g0719 386 SUPERFAMILY Oxysterol-binding protein-like 37 370 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0719 Gso-Chr13 21474115 21479401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0719 K22285 - gmx:100813302 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0719 13 21474115 21479401 Gso17g0502 17 4562527 4565702 GST
Gso13g0719 13 21474115 21479401 Gso15g1356 15 14345389 14352266 PCT
Gso13g0719 13 21474115 21479401 Gso9g0498 9 5331230 5337577 PCT
Gso15g1356 15 14345389 14352266 Gso13g0719 13 21474115 21479401 PCT
Gso9g0498 9 5331230 5337577 Gso13g0719 13 21474115 21479401 PCT