Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0425 ATGCTGGACAAATCAATTAGAGAAATAGATCGAGAGAGACAAGGTTTGCAGTCACAGGAGAAGAAACTGATATTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAAAGTGATGGCAAAAGATCTTGTTAGAACAAAGCATCAGATTGAAAAGTTTTATAAGCTCAAATCACAGCTCCAGGGTGTATCCCTCAGAATTCAAACTTTGAAATCAACACAAGCAATGGGGGAGGCAATGAAAGGTGTGACTAAGGCAATGGGACATATGAATAGGCAGATGAACTTGCCATCATTGCAGAAAATCTTACAAGAATTTGAGACACAGAATGAGAGGATGGAATTGATTACAGAGGTGATGGGAGATGCAATAGATGATGCTTTGGAAGGGGATGAGGAAGAAGAAGAAACAGAAGACCTAGTGAACCAGGTTCTTGATGAGATTGGAATTGACATAAACCAAGAGCTTTTGAGTGCACCATCAACTGCAGTTGCTGCCTCAGCTGCAAAGACTAAGGTGCCTCAAGTTGAAACTGTTGGGAATGATGATGCCACGATAGATAGCGATTTGCAGGCAAGGTTAGACAATTTAAGAAAAATGTAA 612 0.4069 MLDKSIREIDRERQGLQSQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTKHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGHMNRQMNLPSLQKILQEFETQNERMELITEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINQELLSAPSTAVAASAAKTKVPQVETVGNDDATIDSDLQARLDNLRKM* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0425 203 Coils Coil 2 26 - -
Gso17g0425 203 Pfam Snf7 2 166 IPR005024 GO:0007034
Gso17g0425 203 Gene3D - 1 160 - -
Gso17g0425 203 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 203 - -
Gso17g0425 203 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 203 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0425 Gso-Chr17 3871084 3873311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0425 K12191 - gmx:100819241 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0425 17 3871084 3873311 Gso17g0425 17 3871084 3873311 ECH
Gso17g0425 17 3871084 3873311 Gso15g1430 15 16003096 16008248 PCT
Gso15g1430 15 16003096 16008248 Gso17g0425 17 3871084 3873311 PCT