Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1430 ATGAGTTTCATCTTTGGAAAGCGAAAAACCCCCGCAGAGCTTCTGCGGGAAAATAAGAGGATGCTGGACAAATCAATCAGAGAAATTGAGCGTGAGCGGCAAGGATTGCAAACACAAGAAAAGAAATTGATTGCGGAGATAAAGAAAAGTGCCAAACAGGGCCAGATGGGAGCTGTTAGAGTTATGGCAAAAGATCTTGTTAGAACAAGGCATCAGGTTGAGAAGTTTTATAAGCTAAAATCTCAGCTCCAAGGTGTATCACTCAGAATTCAGACTTTGAAATCTACACAAGCAATGGGTGAGGCTATGAAAGGCGTGACAAAGGCCATGGGGCAAATGAATAGGCAAATGAACTTGCCATCTTTGCAGAAAATCATGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGACATCTGAGATGATGGGAGATGCAATAGATGATGCTTTGGAAGGAGAAGAAGATGAAGAGGAAACTGAAGATCTAGTTAACCAAGTCCTTGATGAGATTGGAATTGACATCAACCAAGAGCTTGTAAATGCACCATCATCAGCTGTTGCTGCCCCGGCTTCAAAGACAAAGGTACCTCAAGTTGAAACGACTGGGAATGATGATGGCGGGATAGATAGTGATTTACAGGCAAGGTTAGACAATTTAAGAAAAATGTAA 672 0.4152 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELVNAPSSAVAAPASKTKVPQVETTGNDDGGIDSDLQARLDNLRKM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1430 223 MobiDBLite consensus disorder prediction 184 223 - -
Gso15g1430 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
Gso15g1430 223 Coils Coil 12 46 - -
Gso15g1430 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Gso15g1430 223 Gene3D - 6 181 - -
Gso15g1430 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
Gso15g1430 223 Coils Coil 119 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1430 Gso-Chr15 16003096 16008248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1430 K12191 - gmx:100791887 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0425 17 3871084 3873311 Gso15g1430 15 16003096 16008248 PCT
Gso15g1430 15 16003096 16008248 Gso17g0425 17 3871084 3873311 PCT