Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0413 ATGGCGATATTCTCTGAATCGAATCACCATCACAACACTTCCGATGGGGTCTCCCAGCGAGTCAACAGTCCGCGTTTCTCCGGTCCAATGACTCGCCGCGCCCACTCCTTCAAACGTAACAACAGCAGCAACAATAGCAACAACACCGCCACCACCACCTCCCACGGCGGCGGCGGAGGCAGTGGCGGCGTCGAGATTGAGCTTCAAATCAACTCGCCCAGATCGGAGGAAGCGTCGGAGGGTGTGCCGGTGGGGAAGCACAGCCACCATCACGTGACCCAGAGAGTGCACGTGAGAGGGTTGCTGAAGAAGCCCCTTGCGTCCATCGTTGAGGATTTGGGGTTGAGAGAAAGGAAGAAAATTGGGCACTGGATGTTCTTAGTGTTCTGTGGGGTGTGCTTGTTCATGGGTGTTCTCAAGATATGTGCCACTGGTTGGCTTGGATCTGCTATTGAAATAACTCAATCCAATAAGGAACTATCTGACTCCATTCCTAGTCTAACTCTAATGGACAAAAGCTCCCTTGGTTATGCATATAGGGGGGGAGCAAGTGATGTTGAACGAACATTAAAAACAGTAGCAACAGGAGTAGACGGCAGCCATACTGCCATGACTGAAGATTCAGGGATCTGGTCCAAACCCAACAGTGACAATTTCACCAAATGCATAGATCTTCCAAGTAATCATAAAAAGCTAGATGCAAAGACCAATGGCTACATTTTTGTAAATGCAAATGGTGGCCTGAATCAGATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTGTGAAGGCTACACTTGTTCTTCCTTCTCTTGATCACACCTCCTACTGGGCTGATGACAGTGGCTTCAAGGATTTGTTTGATTGGAAGCATTTTATTAATATGCTGAAGGATGATGTCCACATAGTTGAGAAATTACCTCCCGCCTATGCTGGAATTGAGCCTTTCCCAAAAACTCCAATATCTTGGTCAAAGGTTCATTATTATAAGACTGAGGTTCTTCCCCTCCTAAAGCAGCACAAAGTGATGTATTTCACTCATACCGATTCCAGGCTTGATAACAATGACATTCCACGTTCCATACAGAAACTAAGATGCCGTGTAAATTACAGAGCATTGAAATATTCAGCTCCAATTGAAGAACTTGGAAACACACTGGTATCTAGAATGCAACAGAATGGAAATCCTTATCTTGCCCTTCATCTGAGATATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCACAATTTGACTGCAGAAGAAGATGAAGAAATGAGACAGATGCGATATGAAGTCAGTCACTGGAAGGAAAAGGAGATTAATGGGACCGAGAGGAGATTGCTTGGAGGTTGTCCATTAACTCCAAGGGAAACGTCCCTATTACTTAGAGCACTGGGTTTTCCATCACACACCAGGATTTTTCTGGTAGCTGGAGAAGCATATGGAAGAGGAAGTATGAAATATCTTGAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCCTCTGAAGAAGAGTTGAATCCTTTCAAGAATCATCAGAACATGTTGGCTGGTTTAGACTATGTTGTTGCCCTTAAGAGTGATGTATTTCTCTACACTTATGATGGAAATATGGCAAAGGCCGTACAAGGTCATAGGCGCTTTGAAGACTTCAAGAAAACCATCAATCCAGACAAGATGAATTTTGTTAAACTTGTTGATCAGTTGGATGAAGGAAAAATTTCATGGAAAAAGTTCAGCTCCAAGGTAAAAAAGCTTCACACAGATCGAATTGGTGCTCCATATCCAAGGGAGCCTGGAGAATTTCCAAAACTGGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATTTGTGAAACAAGATAG 1887 0.4404 MAIFSESNHHHNTSDGVSQRVNSPRFSGPMTRRAHSFKRNNSSNNSNNTATTTSHGGGGGSGGVEIELQINSPRSEEASEGVPVGKHSHHHVTQRVHVRGLLKKPLASIVEDLGLRERKKIGHWMFLVFCGVCLFMGVLKICATGWLGSAIEITQSNKELSDSIPSLTLMDKSSLGYAYRGGASDVERTLKTVATGVDGSHTAMTEDSGIWSKPNSDNFTKCIDLPSNHKKLDAKTNGYIFVNANGGLNQMRFGICDMVAVAKIVKATLVLPSLDHTSYWADDSGFKDLFDWKHFINMLKDDVHIVEKLPPAYAGIEPFPKTPISWSKVHYYKTEVLPLLKQHKVMYFTHTDSRLDNNDIPRSIQKLRCRVNYRALKYSAPIEELGNTLVSRMQQNGNPYLALHLRYEKDMLAFTGCSHNLTAEEDEEMRQMRYEVSHWKEKEINGTERRLLGGCPLTPRETSLLLRALGFPSHTRIFLVAGEAYGRGSMKYLEDDFPNIFSHSSLSSEEELNPFKNHQNMLAGLDYVVALKSDVFLYTYDGNMAKAVQGHRRFEDFKKTINPDKMNFVKLVDQLDEGKISWKKFSSKVKKLHTDRIGAPYPREPGEFPKLEESFYANPLPGCICETR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0413 628 CDD O-FucT_plant 239 560 IPR024709 -
Gso17g0413 628 MobiDBLite consensus disorder prediction 1 26 - -
Gso17g0413 628 PANTHER O-FUCOSYLTRANSFERASE 28 180 627 - -
Gso17g0413 628 Pfam GDP-fucose protein O-fucosyltransferase 239 554 IPR019378 -
Gso17g0413 628 MobiDBLite consensus disorder prediction 34 58 - -
Gso17g0413 628 PIRSF UCP009360 87 628 IPR024709 -
Gso17g0413 628 MobiDBLite consensus disorder prediction 1 66 - -
Gso17g0413 628 PANTHER OS02G0726500 PROTEIN-RELATED 180 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0413 Gso-Chr17 3774815 3780891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0413 167 625 Miscellaneous Gene Families AT2G37980 60.814 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0413 - - gmx:100801100 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0413 17 3774815 3780891 Gso17g0413 17 3774815 3780891 ECH
Gso13g0798 13 22305987 22311852 Gso17g0413 17 3774815 3780891 GST
Gso17g0413 17 3774815 3780891 Gso15g1466 15 16885585 16890622 PCT
Gso17g0413 17 3774815 3780891 Gso9g0583 9 6921188 6922826 PCT
Gso15g1466 15 16885585 16890622 Gso17g0413 17 3774815 3780891 PCT
Gso9g0583 9 6921188 6922826 Gso17g0413 17 3774815 3780891 PCT