Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1466 ATGACACTAACTAACATGGCGCACAATAACATCAACTCCACCACCATGGATGGCGTGCCTCACCGAGTCAACAGCCCGCGTTACACCGGTTCGATGACTCGTCGAGCTCACTCATTCAAACGCAACAACAACAGCAATAATGAAATTGAGCTCCAAATAAACTCACCCAGATCACCCTTGGTTTCTGCTGAAGGCTCTGTTTTGAAAAGGAATCAGCATCATCATAAGGAGAAAAAGAACAAGTTTGGCCATTGGGTGTTCTTGCTCTTTTGTGGGGTATGCTTGTTTCTGGGTCTTCTCAAGATTTGTGCTTCTGCCTGGTGGTTCGGATCTAAAGTACACAGTACACACGAATCCATTATTCAGGAACTATCTGACTCCATCACTAGTCGAAATCTAATGGATCAAAGCTCCCATGGTTATGCATATAGGGAGGGAGCAAATGAGGTTGAACGAACTCTAAAGATGGTAACTACAGGGGTAATTGATAGCCAGGCTGGCATGGCTGAAGAATCAGGTGTCTGGTCTAGACCCAACTATGACAATTTCACCCAATGTATAGACCTGCCAAGAAATCATAAAAAGCTAGATGAAAAGACCAATGGCTACATTCTAGTAAATGCTAATGGTGGCCTGAATCAAATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTCGATCACACCTCTTACTGGGGTGATGCAAGTGGCTTCAAGGATTTATTTGACTGGAAACATTTTATTGAGACATTGAAGGATGATATCCACGTAGTTGAGACATTACCACCTGCCTATGCTGAAATTGAACCTTTCTCGAAAACTCCAATATCTTGGTCTAAGGCCAGTTACTACAAGAATGAGGTTCTTCCCCTGCTAAAGCAGCATAAAGTGATCTATTTCACCCATACCAATTCCAGACTTGCTAATAATGGAATTCCAAGCTCCATACAAAAGCTAAGATGTCGTGTAAATTATAGAGCATTGAAATATTCAGCTCCGATTGAAGAATTCGGAAGCAAATTAATATCTAGAATGCGACAGAATGAAAATCCTTATCTCGCGCTTCATTTGAGGTATGAGAAGGATATGCTTGCATTTACTGGCTGCAGTCACAATTTGACAGCAGAAGAAGATGAAGAGCTACGACAGATGCGGTATGAAGTTGGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGACTGGAGGTTGTCCATTAACTCCTAGGGAAACTTCCCTATTGCTTAGAGCACTAGGTTTTCCATCACAAACCAGGATTTATCTGGTAGCTGGAGAAGCATATGGTAGAGGAAGTATGAAATATCTTGAGGATGCTTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCCGAAGAAGAGTTGAATCCTTTCAAGAATCACCAGAACATGTTAGCTGGCATAGACTATATTGTTGCACTTCAGAGTGATGTATTTCTCTATACTTATGATGGAAATATGGCAAAGGCAGTACAAGGCCATAGGCACTTCGAAAACTTCAAGAAGACTATCAATCCAGACAAGGTAAATTTTGTTAAACTCGTTGATAAGTTGGATGAAGGAAAAATTTCTTGGAAGAAGTTCAGCTCCAAGGTAAAAAGGCTGCATGAAGATCGAATCGGTGCTCCGTATCCCAGGGAGCGGGGAGAATTTCCTAAGCTAGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATATGTGAAAGAAAATTAGATACTTCACAGTAG 1794 0.4153 MTLTNMAHNNINSTTMDGVPHRVNSPRYTGSMTRRAHSFKRNNNSNNEIELQINSPRSPLVSAEGSVLKRNQHHHKEKKNKFGHWVFLLFCGVCLFLGLLKICASAWWFGSKVHSTHESIIQELSDSITSRNLMDQSSHGYAYREGANEVERTLKMVTTGVIDSQAGMAEESGVWSRPNYDNFTQCIDLPRNHKKLDEKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIETLKDDIHVVETLPPAYAEIEPFSKTPISWSKASYYKNEVLPLLKQHKVIYFTHTNSRLANNGIPSSIQKLRCRVNYRALKYSAPIEEFGSKLISRMRQNENPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVGHWKEKEINGTERRLTGGCPLTPRETSLLLRALGFPSQTRIYLVAGEAYGRGSMKYLEDAFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYIVALQSDVFLYTYDGNMAKAVQGHRHFENFKKTINPDKVNFVKLVDKLDEGKISWKKFSSKVKRLHEDRIGAPYPRERGEFPKLEESFYANPLPGCICERKLDTSQ* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1466 597 PIRSF UCP009360 41 592 IPR024709 -
Gso15g1466 597 CDD O-FucT_plant 203 524 IPR024709 -
Gso15g1466 597 Pfam GDP-fucose protein O-fucosyltransferase 203 518 IPR019378 -
Gso15g1466 597 MobiDBLite consensus disorder prediction 1 23 - -
Gso15g1466 597 PANTHER OS02G0726500 PROTEIN-RELATED 79 594 - -
Gso15g1466 597 PANTHER O-FUCOSYLTRANSFERASE 28 79 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1466 Gso-Chr15 16885585 16890622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1466 88 591 Miscellaneous Gene Families AT2G37980 57.915 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1466 - - gmx:100807090 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1466 15 16885585 16890622 Gso9g0583 9 6921188 6922826 GST
Gso13g0798 13 22305987 22311852 Gso15g1466 15 16885585 16890622 PCT
Gso17g0413 17 3774815 3780891 Gso15g1466 15 16885585 16890622 PCT
Gso15g1466 15 16885585 16890622 Gso13g0798 13 22305987 22311852 PCT
Gso15g1466 15 16885585 16890622 Gso17g0413 17 3774815 3780891 PCT