Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0392 ATGTTGGGGAAGAGGCCCCGGCCAATGATCGGAAAGTTGTCGGAGTTGTTGGTCTCGAGAGGCCGCACGGTGGCATATTTGGACACCACCGGAAGCCCTAGAGGCCCATTAGACATGAAGATGATGCAATCATCACCAAGAGGCTTAAAAAACTATGATCTTGGTGGTGTTGGTCTTGGAATTGTAGTGGCTCTTGATAAATCCAACGAGGTTGCTGCACGTGAAGTTTTGCCCAAACACGCCGTTTGCACCTCCAATTTGAACCGGTCCGGCCCAATCCCGGTTCACTACACCAAAAACCCAGATGAATTTGATGTGGAGGAATACACCTATGTGACATGCCACGTACCTAACAAAACGTTCACTAAGGTATACTATGATGGTGGTGAAGGTGAAATTCGGAGACATTACAACAACAGCAACGTTGGAGTTCTCAGAAGAACCGCACCACAACCTTTGATTGTTGAGGCCGAATCATCGTACCCCACATCGAATTTTCTCAGTTCATGTCACTTATGCGGAAAGAAACTCCACGGCAAAGACATATACATGTACAGAGGAGAGAAAGCGTTTTGTAGCCCAGAGTGTCGTTCGAGTCAAATAATGATGGACGAACGGAAGGAACGGTGTAGGTCAGAAGCTTCAAGGTCTGTGGAAATGTCAAGCTCGCCATATGCAAGGGAACAGATATTTTCAACTGGGATTCTTGCGCTTTAG 717 0.47 MLGKRPRPMIGKLSELLVSRGRTVAYLDTTGSPRGPLDMKMMQSSPRGLKNYDLGGVGLGIVVALDKSNEVAAREVLPKHAVCTSNLNRSGPIPVHYTKNPDEFDVEEYTYVTCHVPNKTFTKVYYDGGEGEIRRHYNNSNVGVLRRTAPQPLIVEAESSYPTSNFLSSCHLCGKKLHGKDIYMYRGEKAFCSPECRSSQIMMDERKERCRSEASRSVEMSSSPYAREQIFSTGILAL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0392 238 Pfam zinc-finger of the FCS-type, C2-C2 158 207 IPR007650 -
Gso17g0392 238 PANTHER OS02G0174800 PROTEIN 1 237 IPR044604 -
Gso17g0392 238 PANTHER FCS-LIKE ZINC FINGER 12 1 237 - -
Gso17g0392 238 ProSiteProfiles Zinc finger FLZ-type profile. 165 208 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0392 Gso-Chr17 3604147 3605430 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0392 - - gmx:100816402 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0392 17 3604147 3605430 Gso17g0392 17 3604147 3605430 ECH
Gso13g0820 13 22506803 22508061 Gso17g0392 17 3604147 3605430 GST
Gso17g0392 17 3604147 3605430 Gso15g1488 15 17402698 17404070 PCT
Gso17g0392 17 3604147 3605430 Gso9g0605 9 7269437 7270777 PCT
Gso15g1488 15 17402698 17404070 Gso17g0392 17 3604147 3605430 PCT
Gso9g0605 9 7269437 7270777 Gso17g0392 17 3604147 3605430 PCT