Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0820 ATGTCGGGGAAGAGGCCCCGGCCAATGATCGGAAAGTTGTCGGAGTTGTTGGTCTCGAGAGGCCGCACGGTGGCACTTTTGGACACCACTGGAAGCCCAAGAGGCCCATTAGACATGAAGATGATGCAATCACCAAGAGGCTTAAAAAATTATGATCTTGGTGGCGTTGGTCTTGGAATTGTGGTGGCTCTTGATAAATCCAATAACGAGGTTGCTGCACGTGAAGTTTTGCCCAAACACACCGTTTGCACCTCCAATTTGAACCGGTCCGGCCCAATTCCGGTTCACTACACCAAAAACCCAGATGAATTTGATGTCGAGGAATACACCTATGTGACATGCCGCGTACCTAACAAAACGTTCACCAAGGTATACTATGATGGTGGTGAAGGTGATATTATTCGGAGACAAAACAACAACAACAACAAAAACAACGTTGTAGTTCTCAGAAGAACCGAACCACAACCTTTGATTGAGCCCGAATCATCGTACCCCACATCGAGTTTTCTCAGTTCATGTCACTTATGTGGAAAGAAACTCCACGGCAAAGACATATACATGTACAGAGGAGAGAAAGCGTTTTGTAGCCCTGAGTGTCGTTCGAGTCAAATAACGATGGACGAAAGGAAGGAACGGTGTAGGTCAGAAGCTTCAAGGTCTGTGGAAATGTCAAGTTCGCCATATACAAGGGAGCAAATATTTTCAACTGGGATTCTTGCGCTTTAG 726 0.4601 MSGKRPRPMIGKLSELLVSRGRTVALLDTTGSPRGPLDMKMMQSPRGLKNYDLGGVGLGIVVALDKSNNEVAAREVLPKHTVCTSNLNRSGPIPVHYTKNPDEFDVEEYTYVTCRVPNKTFTKVYYDGGEGDIIRRQNNNNNKNNVVVLRRTEPQPLIEPESSYPTSSFLSSCHLCGKKLHGKDIYMYRGEKAFCSPECRSSQITMDERKERCRSEASRSVEMSSSPYTREQIFSTGILAL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0820 241 PANTHER OS02G0174800 PROTEIN 1 241 IPR044604 -
Gso13g0820 241 Pfam zinc-finger of the FCS-type, C2-C2 162 210 IPR007650 -
Gso13g0820 241 ProSiteProfiles Zinc finger FLZ-type profile. 168 211 IPR007650 -
Gso13g0820 241 PANTHER DUF581 FAMILY PROTEIN 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0820 Gso-Chr13 22506803 22508061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0820 - - gmx:100499825 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0820 13 22506803 22508061 Gso17g0392 17 3604147 3605430 GST
Gso13g0820 13 22506803 22508061 Gso15g1488 15 17402698 17404070 PCT
Gso13g0820 13 22506803 22508061 Gso9g0605 9 7269437 7270777 PCT
Gso15g1488 15 17402698 17404070 Gso13g0820 13 22506803 22508061 PCT
Gso9g0605 9 7269437 7270777 Gso13g0820 13 22506803 22508061 PCT