Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0375 ATGGCATCGTTAGAGAATGAACCTTGTCACACTCCTTCTGCCTCTGACCAATCCCCTTTTTCTCCTCCTCCTCCTCCTCCTTCCAATGTCTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGAACATATTGGAAAGTACTAAAGATTGACCGTCTCGATCCTTCTGAGCTAAATTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGCTCTGATCTTTTGAGACGGATACATGAGGGTAACAAGTCCACTGGTGGACTAAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGCGAGATGATTCCATTGCCAAATTCTTCAGTTCGGTCTAACATCAATTTTAAAAATGAAAACAGGTACAAGAGGCTCCTATGCATGGTCGACCTTACAAAGGACTTTTTTTTCAGCTATTCATACCAAATTATGCGTAGTCTTCAAAGGAACATGTGTGATAATGAGACAGGCCATGTTCTTTATGAGACCATGTTTGTTTGGAATGAGTTCTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCGCTAGTGTATGGATTTTTTAAACAGGAAATGCTAATGATATCCAGACGGGAGTTCACACTTACGCTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGTGGTGTTAATGAGAAAGGAAGAGTAGCAAATGACGTTGAGACAGAACAAATAGTCTTTGAGGATGTTGCAGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAAAAGGATCAGAGTTATCAAGCCACTAGATATCACTTTGAAAACCTTGTCAAAAGATATGGAAATCCCATAATTATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGCGAGTCCATACTTCGTCAAGAGTTTGCTAATGCCATAGATTTCATTAATAAAGATTTATCGGACGAAAACAGGCTTAGGTTCCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCAGCTTCTCGGCAAAGTGGCTGCATATGCATTGACATTAACAGGGTTTTTCTATTGCCAAACAACACCAACCTTGAGACCAGAAGAATGTCTGAAATGGCCAAGTACCAATCTTACATGCAGCAATGTTGATAAGGGAACCTTTTCACCTACTAGACATGTCAATGATGACAACAGGGTTGACAACAGGGATGCAGATGAAAATTATTCTGTCAAACCACCCATGTTGCAGAGGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTCCATGCTCTGGGGGTTATTGACCACCCAAAAATTGATCTTGATGAGCCTGTAGCAGATGATTTGATGGGGTTTTATGAGCGGATGGGTGATACACTTGCACATCAGTATGGTGGTTCTGCTGCACACAACAAGATTTTCTCTGAGAGGAGGGGCCAGTGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTATAGCAATGCATACATGGATGCTATGAAACAGGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGCAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCTCTATGATGCAGGAAGACATGGAGATGATGATGCAAGGTCATTTTTCAAAAGATCCTTCTCAGATGGAAACATTCTTAATGAAAGTTCTACACCGATGTCAGCCCCAAAGGCCAAGCACGAAAAATTCCCAAGCCAAGGCGGCTTACCAGATCGATCAGAAGAAGGAAGCAAGGGTCTTTGTGAGTCATCACCAGAAATATCCACTACTGACAGTGACATCTCATTTTCAAGGTACACTCCCTCAATGCCTCGGAGACAGCTCTTTGGAGATATGCAAAGAGAGCGCTGCCTTGAAAGTGAACATATTTACTATTCTGATCACGGGGATTCCTTCAGCTGCTCCAACTTTGTTGACCTGGATTGGCTCTCTTCTTCAGGAAATTCATGCGAAGAAGAGCCATTCGAGAGGTCATCAATTACCAACTCTCCAATTGCTGGAGTTTCTTCAGAAAATGTTATCAATGGAATGATGGTAGGTGAGGCAACTGCCTCCACTAGTGATTGGGGGGCCTCCAGCCTAAAGGGAAGGGAACAAACTGAATCCGAGTTATCTTACGATGATGCACGGTCCAACACACCAGAAGAATTTCCAGATACTTTTGTGAACTGGGTGACTTATGGACAAACACTTTGCCATTGA 2517 0.4231 MASLENEPCHTPSASDQSPFSPPPPPPSNVCMQKFRLYETRSNFYMIGRDKSRTYWKVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLPNSSVRSNINFKNENRYKRLLCMVDLTKDFFFSYSYQIMRSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQEMLMISRREFTLTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVAEGLPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKKDQSYQATRYHFENLVKRYGNPIIILNLIKTHEKKPRESILRQEFANAIDFINKDLSDENRLRFLHWDLHKHFQSKATNVLQLLGKVAAYALTLTGFFYCQTTPTLRPEECLKWPSTNLTCSNVDKGTFSPTRHVNDDNRVDNRDADENYSVKPPMLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGVIDHPKIDLDEPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQDAINVFLGHFQPQQGKPALWELGSDQLYDAGRHGDDDARSFFKRSFSDGNILNESSTPMSAPKAKHEKFPSQGGLPDRSEEGSKGLCESSPEISTTDSDISFSRYTPSMPRRQLFGDMQRERCLESEHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEEEPFERSSITNSPIAGVSSENVINGMMVGEATASTSDWGASSLKGREQTESELSYDDARSNTPEEFPDTFVNWVTYGQTLCH* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0375 838 MobiDBLite consensus disorder prediction 651 705 - -
Gso17g0375 838 MobiDBLite consensus disorder prediction 792 820 - -
Gso17g0375 838 MobiDBLite consensus disorder prediction 805 819 - -
Gso17g0375 838 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 26 838 - -
Gso17g0375 838 MobiDBLite consensus disorder prediction 1 16 - -
Gso17g0375 838 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 26 838 IPR043573 GO:0043813|GO:0046856
Gso17g0375 838 MobiDBLite consensus disorder prediction 1 28 - -
Gso17g0375 838 Pfam SacI homology domain 107 403 IPR002013 GO:0016791
Gso17g0375 838 ProSiteProfiles Sac phosphatase domain profile. 170 557 IPR002013 GO:0016791
Gso17g0375 838 MobiDBLite consensus disorder prediction 687 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0375 Gso-Chr17 3371160 3380600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0375 31 838 Acyl Lipid Metabolism Gene Families AT5G20840 62.791 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0375 K22913 - gmx:100781284 1663.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0375 17 3371160 3380600 Gso17g0375 17 3371160 3380600 ECH
Gso13g0844 13 22759297 22768818 Gso17g0375 17 3371160 3380600 GST
Gso17g0375 17 3371160 3380600 Gso15g1507 15 18018339 18034427 PCT
Gso17g0375 17 3371160 3380600 Gso9g0625 9 7722586 7739401 PCT
Gso15g1507 15 18018339 18034427 Gso17g0375 17 3371160 3380600 PCT
Gso9g0625 9 7722586 7739401 Gso17g0375 17 3371160 3380600 PCT