Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0844 ATGGCATCTTCAGAGAATGAACCTTGTCACTCTCCTTCTGCCTCTGATCAATCCCCTTCTCCTCCTTCTCCTCCTTCCAATGTCTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATATTGGAAAGTACTAAAGATTGACCGTCTTGATCCTTCCGAGCTAAATTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTTTGAGACGGATACATGAGGGTAACAAGTCCACAGGTGGACTAAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGCGAGATGATTCCATTGCCAAATTCTTCAGTTCGGTCTAACATCAATTCTAAAAATGAAAACAGGTACAAGAGGCTCCTATGCATGGTTGACCTTACAAAGGATTTCTTTTTCAGCTACTCATACCACATTATGCGTAGTCTTCAAAGGAACATGTGTGATGATGAGACAGGCCATATTCTTTATGAGACCATGTTTGTTTGGAACGAATTCTTAACTCGAGGAATTCGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTGTATGGATTTTTTAAACAGGAAATGCTTATGATATCCAGACGGGAGTTCACACTTACGCTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGTGGTGTTAATGAGAAAGGAAGAGTAGCAAATGATGTTGAGACAGAACAAATAGTCTTTGAGGATGTTGCTGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAAAAGGATCAGAATTATCAAGCCACTAGACTTCACTTTGAAAACCTTGTCAAAAGATATGGGAATCCCATAATTATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGCGAGTCCATACTTCGTCAAGAGTTTGCTAATGCCATAGATTTCATTAATAAAGATTTATCCGAGGAGAACAGGCTTAGGTTCCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCAGCTTCTTGGCAAAGTGGCTGCATATGCATTGACATTAACAAGTTTTTTCTATTGCCAAACGACACCAACCTTGAGACCAGAAGAAAGTCTGAAATGGCAAAGTACAGATGTTGATGAGGGAACCTTTTCACCTACTAGACATGCCAATGATGATAATGGGGATGCTAATAATTTAGAGAGGAAACCAAGTGAAGGAAACAATGATGCCAATGAAAATCATTCTGTCAAACCACCCATGTTGCAGAGGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACTAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTCCATGCTCTGGGAGTTATTGACCACCCAAAAATTGATCTTGATGACCCTGTAGCAGATGATTTGATGGGGTTTTATGAGCGGATGGGTGATACACTCGCACATCAGTATGGTGGTTCTGCTGCTCACAACAAGATTTTCTCTGAGAGGAGGGGCCAGTGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTATAGCAATGCATACATGGATGCTATGAAACAGGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGTAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCTCTATGATGCAGGAAGACATGGAGATGACGATGCTAGGTCATTTTTCAAAAGATCCTTCTCAGATGGAAACATTCTTAATGAAAGTTCTACACCGATGTCAGCCCCAAAGGCCAAGCATGAAAAATTCCCAAGCCAAGGCGGCTTACCAGATCGATCAGAAGAAGGAAGCAAGGGTCTCTGTGAGTCATCACCAGAAATATCTACTACTGAGAGTGACATCTCATTTTCAAGGTACACTCCCTCAATGCCTCGGAGACAGCTCTTTGGAGATATGCAAAGAGAGCGCTGCCTTGAAAGTGAACATATTTACTATTCTGATCATGGGGATTCCTTCAGCTGCTCCAACTTTGTTGACCTGGATTGGCTATCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATTTGAGAGGTCATCAATTACCAACTCTCCAATTGCTGGAGTTTCTTCAGAAAATGTTGTCAATGGAATAATGGTAGGTGAGGCAACTGCCTCCACTAGTGATTGGGGGGCCTCCAGCCTAAAGTATTCTCAGGGAAGGGAACAAACTGAATCCGAGTTATCCTACGGTGATGCACGGTCCAACACACCAGAGGAATTTCCAGATACTTTTGTAAACTGGGTGACTTATGGACAGACACTTTGCCATTGA 2535 0.4205 MASSENEPCHSPSASDQSPSPPSPPSNVCMQKFRLYETRSNFYMIGRDKSRTYWKVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLPNSSVRSNINSKNENRYKRLLCMVDLTKDFFFSYSYHIMRSLQRNMCDDETGHILYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQEMLMISRREFTLTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVAEGLPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRQEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKATNVLQLLGKVAAYALTLTSFFYCQTTPTLRPEESLKWQSTDVDEGTFSPTRHANDDNGDANNLERKPSEGNNDANENHSVKPPMLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGVIDHPKIDLDDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQDAINVFLGHFQPQQGKPALWELGSDQLYDAGRHGDDDARSFFKRSFSDGNILNESSTPMSAPKAKHEKFPSQGGLPDRSEEGSKGLCESSPEISTTESDISFSRYTPSMPRRQLFGDMQRERCLESEHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEEEPFERSSITNSPIAGVSSENVVNGIMVGEATASTSDWGASSLKYSQGREQTESELSYGDARSNTPEEFPDTFVNWVTYGQTLCH* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0844 844 MobiDBLite consensus disorder prediction 654 706 - -
Gso13g0844 844 Pfam SacI homology domain 105 401 IPR002013 GO:0016791
Gso13g0844 844 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 20 844 IPR043573 GO:0043813|GO:0046856
Gso13g0844 844 MobiDBLite consensus disorder prediction 1 26 - -
Gso13g0844 844 MobiDBLite consensus disorder prediction 801 820 - -
Gso13g0844 844 MobiDBLite consensus disorder prediction 801 827 - -
Gso13g0844 844 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 20 844 - -
Gso13g0844 844 MobiDBLite consensus disorder prediction 469 484 - -
Gso13g0844 844 MobiDBLite consensus disorder prediction 690 706 - -
Gso13g0844 844 MobiDBLite consensus disorder prediction 439 488 - -
Gso13g0844 844 MobiDBLite consensus disorder prediction 439 461 - -
Gso13g0844 844 ProSiteProfiles Sac phosphatase domain profile. 168 560 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0844 Gso-Chr13 22759297 22768818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0844 30 844 Acyl Lipid Metabolism Gene Families AT3G43220 64.347 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0844 K22913 - gmx:100810079 1678.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0844 13 22759297 22768818 Gso17g0375 17 3371160 3380600 GST
Gso13g0844 13 22759297 22768818 Gso15g1507 15 18018339 18034427 PCT
Gso13g0844 13 22759297 22768818 Gso9g0625 9 7722586 7739401 PCT
Gso15g1507 15 18018339 18034427 Gso13g0844 13 22759297 22768818 PCT
Gso9g0625 9 7722586 7739401 Gso13g0844 13 22759297 22768818 PCT