Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0365 ATGTTTAGATTAAGGAGTTGTGAAGGCCCTGTGCGCTACTTGTATCAGCAAACTCGGCATCACCTTCACCATAACAACAATATTATGGCTTATTTAGTTGGTTATGATCCTTGTTCCCACTTGAGCAAGGCCTTTTCTCAGTATCCTTCTCTTGCTTCTTCTGATCGTGGTAGCTACCTGTCTTTCCGATTTCTCCATAATCTTGTTTATGCTGATGTTTTTGGGGTTAGCAGAAGCATTGCTTTTGGTCCTAGAAGTTGTAGCTTTGACACTAGTGGTAGCTGTAGTAGTACTAATAGTGATAGGATCTTTGTGAGGGCAAAGGCAAGGTCCCGTGGCTTTGCATCGAATTGCCGCCAGCCGATGCTGGCTGATTTGGAGCAAAGGAATTTTGTTAGGAGTGATGAGAGTGATGCTACTTTGGTTAAGGTTGATAATGGATCTATAAATGGATGTCCTGCCAAGCCTCCTTGTTTCAATGATCATCGATTGTCCCAGAAACTTGTGGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTTGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAATATCACGTGTATGAGTTCTGCAAGATATGGAATTGTTCACGTGATGAAGCTGATATCCGTGTTCATGAGTTTTTTAAGACACCATATTTCAAGTCAGGGATCCACCCTCTTCCAGGTGCTCAGATGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACATCACGACAGAATGCAATTAAGGACCACACAATTGAGTGGCTAGAGAAGAATTATCCTGGACTGTTTCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCTTTAAATGCCAAGGTTCTTATTGATGATAACCCACGGTATGCCATAGAGTGTGCTGATGTTGGAATTAGAGTCTTACTTTTTGATTATGAAAACTCATATCCTTGGTGCAAGAACGAGTCTGTTGATCAGCATCCTCTGGTGACCAGAGTTAAGAACTGGGAAGAAGTGGAACAACAATTAATGTCACTGATAGCTTCTTAG 1113 0.4097 MFRLRSCEGPVRYLYQQTRHHLHHNNNIMAYLVGYDPCSHLSKAFSQYPSLASSDRGSYLSFRFLHNLVYADVFGVSRSIAFGPRSCSFDTSGSCSSTNSDRIFVRAKARSRGFASNCRQPMLADLEQRNFVRSDESDATLVKVDNGSINGCPAKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQMALQKLSRFCSLSVVTSRQNAIKDHTIEWLEKNYPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECADVGIRVLLFDYENSYPWCKNESVDQHPLVTRVKNWEEVEQQLMSLIAS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0365 370 PANTHER NUCLEOTIDASE YQFW-RELATED 76 369 - -
Gso17g0365 370 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 168 364 IPR010708 GO:0008253|GO:0009264
Gso17g0365 370 Gene3D - 216 367 IPR023214 -
Gso17g0365 370 SUPERFAMILY HAD-like 161 365 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0365 Gso-Chr17 3285766 3289412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0365 - - gmx:100783615 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0365 17 3285766 3289412 Gso17g0365 17 3285766 3289412 ECH
Gso13g0852 13 22850621 22853912 Gso17g0365 17 3285766 3289412 GST
Gso17g0365 17 3285766 3289412 Gso9g0649 9 8398547 8403264 PCT
Gso9g0649 9 8398547 8403264 Gso17g0365 17 3285766 3289412 PCT