Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0852 ATGTTTAGATTAAAGAGTTGTGAAGGCCCTGTGCGCTACTTGTATCAGCAAACTTGGCATCACCTTTATCATAACAATATTATGGCTTATTTAGTTGGTTATGATCCTTGTTCCCACTTGAGCAAGGCCTTTTCTCAGTACCCTTCTCTTTCTTTTTCTGATCGTGGTAGCTACCTGTCTTTCCCATTTCTCCGTAATCTTGTTTATGCTAATGTTTTTGGGGTTAGCAGAAGCATTGGTTTTGGTACTAGAGGTTGTAGCTTTGACACTAGTGGTAGCTGCAGTGGTAATAGTGATAGGATCTTTGTGAGGGCAAAGACAAGGTCCCGTGGCTTTGCATCGAATCGCCGCCAGCCGATGTTGGCTGATTTGGAGCAAAGGAATTCTGTTAGGAGTGATGAGAGTGATGCTACTTTGGTTAAGGTTGATAATGGATCTATAAATGGAAGTCCTGCTAAGCCTCCTTGTTTCAGTGATCATCGATTATCCCAGAAACTTGTGGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTTGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAGTATCACGTGTATGAGTTCTGCAAGATATGGAATTGTTCACGTGATGAAGCTGATATCCGTGTTCACGAGTTTTTTAAGACACCATATTTCAAGTCAGGGATCCATCCTCTTCCAGGTGCTCAGATGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACATCACGGCAGAATGCAATCAAGGACCGCACAATTGAGTGGATAGAGAAGAATTATCCAGGACTGTTTCGTGAGATTCACTTCGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCTTTAAAAGCCAAGGTTCTTATTGATGATAACCCACGATATGCCATAGAGTGTGCTGATGTTGGAATTAGAGTCTTACTTTTTGATTATGAAAACTCATATCTTTGGTGCAAGAACGAGTCTGTTGATCAGCATCCTCTGGTGACCAAAGTTAAGAACTGGGAAGAAGTGGAACAACAATTAGTGTCTCTGATAGCTTCTTAG 1107 0.4092 MFRLKSCEGPVRYLYQQTWHHLYHNNIMAYLVGYDPCSHLSKAFSQYPSLSFSDRGSYLSFPFLRNLVYANVFGVSRSIGFGTRGCSFDTSGSCSGNSDRIFVRAKTRSRGFASNRRQPMLADLEQRNSVRSDESDATLVKVDNGSINGSPAKPPCFSDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIHPLPGAQMALQKLSRFCSLSVVTSRQNAIKDRTIEWIEKNYPGLFREIHFGNHFALDGVSRPKSEICRSLKAKVLIDDNPRYAIECADVGIRVLLFDYENSYLWCKNESVDQHPLVTKVKNWEEVEQQLVSLIAS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0852 368 Gene3D - 202 365 IPR023214 -
Gso13g0852 368 SUPERFAMILY HAD-like 159 362 IPR036412 -
Gso13g0852 368 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 362 IPR010708 GO:0008253|GO:0009264
Gso13g0852 368 PANTHER NUCLEOTIDASE YQFW-RELATED 73 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0852 Gso-Chr13 22850621 22853912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0852 - - gmx:100793947 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0852 13 22850621 22853912 Gso17g0365 17 3285766 3289412 GST
Gso13g0852 13 22850621 22853912 Gso9g0649 9 8398547 8403264 PCT
Gso9g0649 9 8398547 8403264 Gso13g0852 13 22850621 22853912 PCT