Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0275 ATGGAAGGTGCAGACGAAGGAATAGAGAGGGTTGTGGATTCGAAGGACTTGCAGCAACAGAGCAAAGCTTTCGACAAGCTCACAGACCGCGTCGAGGATCGCCAACTCGATTCTTCTCGCGTCCAAGAGGCCATGGCATCAATTGCTGCATCTGCTGAAGCTGACTGGCAAGCCATGCGTATGAGGGAGAAAGAGTTAGCTGCTGTCAAGATAAATGCCGCTGATGTTGACATAATTGCGAATGAACTAGAGCTGGATAAAAAGGTTGCTGAAAGGACCTTGCGTGAGCATAAAGGTGATGCAGTAGCTGCAATCCGGCACTTGCTTCGCTAG 333 0.4985 MEGADEGIERVVDSKDLQQQSKAFDKLTDRVEDRQLDSSRVQEAMASIAASAEADWQAMRMREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLR* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0275 110 Coils Coil 80 100 - -
Gso17g0275 110 CDD UBA_HYPK 69 109 IPR038922 -
Gso17g0275 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 109 - -
Gso17g0275 110 PANTHER BNAA05G30770D PROTEIN 1 109 - -
Gso17g0275 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Gso17g0275 110 Gene3D - 70 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0275 Gso-Chr17 2477645 2478699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0275 - - gmx:100789285 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0275 17 2477645 2478699 Gso17g0275 17 2477645 2478699 ECH
Gso7g2022 7 44250670 44251613 Gso17g0275 17 2477645 2478699 GST
Gso17g0275 17 2477645 2478699 Gso15g1171 15 11500206 11503358 PCT
Gso17g0275 17 2477645 2478699 Gso9g0302 9 2889657 2892091 PCT
Gso15g1171 15 11500206 11503358 Gso17g0275 17 2477645 2478699 PCT
Gso9g0302 9 2889657 2892091 Gso17g0275 17 2477645 2478699 PCT