Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1171 ATGGAGGGTGGAGAGGAAGGATTGGAGATGATGGTGGACTCAAAGGACTTACAGCAACAGAGCAAAGCGTTGGACAAACTCACTGATCACGTCGAGGATCGCCAACTCGATTCCACTCGCGTCCAAGAGGCCATGGCTTCCATCGCTGCTTCTGCCGAAGCTGATCGCAATGCCATGCGCATCAGGGAAAAAGAATTGGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATTGCAAATGAACTAGAGTTGGACAAAAAGGTTGCTGAAAGAACTTTGCGTGAGCATAAAGGTGATGCAGTTGCTGCTATTCGGCACTTGCTTCACTAG 333 0.4775 MEGGEEGLEMMVDSKDLQQQSKALDKLTDHVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLH* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1171 110 Coils Coil 80 100 - -
Gso15g1171 110 CDD UBA_HYPK 69 109 IPR038922 -
Gso15g1171 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Gso15g1171 110 Gene3D - 70 108 - -
Gso15g1171 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 1 109 - -
Gso15g1171 110 PANTHER BNAA05G30770D PROTEIN 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1171 Gso-Chr15 11500206 11503358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1171 - - gmx:100527445 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1171 15 11500206 11503358 Gso9g0302 9 2889657 2892091 GST
Gso7g2022 7 44250670 44251613 Gso15g1171 15 11500206 11503358 PCT
Gso17g0275 17 2477645 2478699 Gso15g1171 15 11500206 11503358 PCT
Gso15g1171 15 11500206 11503358 Gso7g2022 7 44250670 44251613 PCT
Gso15g1171 15 11500206 11503358 Gso17g0275 17 2477645 2478699 PCT