Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1642 ATGTCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAACACATTGAAAATGGGTCAAAAGGCCAAAGAACCCGCGGTTGCAGAGTTCATATCAGCACTAGCCGCTGGCAACACTGCACAACTAATGGTTGTGGCATGTGCTGGTGCAGCAGACTCAACCACACTAGCATTGGTCACTGCTGCACACCAAACTGGTGGCCATGTTGTTTGCATTGTCCCTAGCCATGAGGAATTAAGTGCCTCCAAAAAAGTCCTTGGAGTAAATGCAAGTCAAGTCCAATTCATGGTTGGAGCGGCTCAAGAAGAACAAGTGCTGTTAAGCCAAGCAGATTTTGTGCTCATTGATTGCAACCTTGTGAGCCATGGAGAGATTGTTAAAGCAATCCAAAGTGGTGGTGGTGGCATGCAAAATGGCACAGTGGTTGTTGGCTACAATGCACTTAATTGTAGAGGGTCTTGGTGGTCTTCTGGATCAAAAACTCAGTTGTTGCCTATAGGAAAAGGGCTTTTGGTGACAAGATTTGGAGCAAGTGCTACTAGTCCAAAATATGGATCTGGAGTGAGTAAGATCAAAAGTAGTCGTTGGATTGTCAAGGTGGACAAATGCACTGGTGAAGAACATGTGTATAGGATCAGAGTTCCACAAGGAAAAGTGATTTAA 666 0.4505 MSCWSAENATKAYLNTLKMGQKAKEPAVAEFISALAAGNTAQLMVVACAGAADSTTLALVTAAHQTGGHVVCIVPSHEELSASKKVLGVNASQVQFMVGAAQEEQVLLSQADFVLIDCNLVSHGEIVKAIQSGGGGMQNGTVVVGYNALNCRGSWWSSGSKTQLLPIGKGLLVTRFGASATSPKYGSGVSKIKSSRWIVKVDKCTGEEHVYRIRVPQGKVI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1642 221 Pfam Protein of unknown function (DUF1442) 3 212 IPR009902 -
Gso16g1642 221 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Gso16g1642 221 PANTHER BNAA09G06020D PROTEIN 1 220 - -
Gso16g1642 221 PANTHER DUF1442 FAMILY PROTEIN 1 220 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1642 Gso-Chr16 37116980 37118259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1642 - - gmx:100788726 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1642 16 37116980 37118259 Gso9g1271 9 36265802 36267044 GST
Gso16g1642 16 37116980 37118259 Gso10g1613 10 42652139 42653243 PCT
Gso10g1613 10 42652139 42653243 Gso16g1642 16 37116980 37118259 PCT