Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1613 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTACCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAGCCAGATGTAGCAGAGTTTATATCAGCACTAGCTGCAGGAAACAATGCACAACTTATGGTTGTGGCATGTGGTGGTGCAGCTGACTCCACCACACTAGCATTGGTTGCTGCTGCTAACCAAACTGGTGGCAAAGTCATTTGTATTGTCCCTAGCCATGAAGAGCTAAGAGCTTCCAAAATTTCCATGGGAAGAATGGCTTCTCATCAAGTTCAATTCATGGTTGGAGAAGCTCAAGAAGTGCTTTTAGAGCACTATGATCAGGCAGCAGATTTTGTGCTCATTGACTGCAACCTTGAGAACCATGAAGAGATCCTTAGAGCAGTTCAAGAGGGTAGGAAGCAAAATGGGACAGTGGTTGTAGGGTACAATGCATTTAGCTGCAGAAAGTCTTGTTTGGCATGTGGTTCAAAAACTCAGCTTCTGCCTATAGGAGGAGGTTTACTTGTGACAAGATTTGGAGTGAGTGAAACAAGTCCAAAATATGGAAACAGAATTATGGGAAAAGTCAAAAGCCGTTGGGTTGTAAAGGTAGATAAATGCACAGGCGAGGAACATGTGTTCAGGGTCAGATTTCCTCAAAGGAAAGTGGTCCAAGCTTAA 675 0.44 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACGGAADSTTLALVAAANQTGGKVICIVPSHEELRASKISMGRMASHQVQFMVGEAQEVLLEHYDQAADFVLIDCNLENHEEILRAVQEGRKQNGTVVVGYNAFSCRKSCLACGSKTQLLPIGGGLLVTRFGVSETSPKYGNRIMGKVKSRWVVKVDKCTGEEHVFRVRFPQRKVVQA* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1613 224 Pfam Protein of unknown function (DUF1442) 3 213 IPR009902 -
Gso10g1613 224 PANTHER DUF1442 FAMILY PROTEIN 1 224 IPR009902 -
Gso10g1613 224 Gene3D Vaccinia Virus protein VP39 5 176 IPR029063 -
Gso10g1613 224 PANTHER BNAA09G06020D PROTEIN 1 224 - -
Gso10g1613 224 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 145 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1613 Gso-Chr10 42652139 42653243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1613 - - gmx:100775961 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1613 10 42652139 42653243 Gso10g1613 10 42652139 42653243 ECH
Gso16g1642 16 37116980 37118259 Gso10g1613 10 42652139 42653243 PCT
Gso9g1271 9 36265802 36267044 Gso10g1613 10 42652139 42653243 PCT
Gso10g1613 10 42652139 42653243 Gso16g1642 16 37116980 37118259 PCT
Gso10g1613 10 42652139 42653243 Gso9g1271 9 36265802 36267044 PCT