Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1630 ATGGCCCTCGAAACCTGGCTCATCAAGGTCAAAACGGCGCTGTCGCACAGCCTCACGAAGAAACCGTCGTTTTCCTCGTCGAAGCCAAAACGCGTCGCCGTTTTGTCCTTCGAGATCGCGAACGTGATGTCGAAGCTCCTCCACCTCTGGCAGTCCCTCTCCGACGCCAACGTCGTCCGCCTCCGAAACGATGCCATCTCCCTCGAAGGCGTGCGCAAGCTCATCTCAAACGACGAGTCGTTTCTCCTAAGCCTCGCCGTGGCCGAGTTCGCGGACTCGCTCCGACTCGTCGCCGACTCGGTCTCACGACTCAGCCACAACTGCCACGACCCCACTCTCCGATCTTTCTTCCGAGTCCTCACCGAGTTCGCCAACTCGGGCCTCGACCCGCACGCGTGGACCCTCACTGCCCCCAAAGACATCGAAACTAAACACAGAAAATTGCAACATTACGTGACCCTCACGGCAACGCTCCACAAAGAAATCGACGCGCTCACGCTCCTCGAGAGCGCGTTCAAAAAAGCGCATCTCAACGCTGACACCACCACCGAGCAGCACAAGAAACTCAACGATCTTCAGCAAAAGATCTTATTGCAGAAGCAAGAGGTGAAGAACCTGAAGGAACGTTCATTATGGAACAAAAACTTCGATGGGGTTGTGTTGTTGTTGGCAAGGTTCGTTTTCACCGTCTTAGCAAGGATTAAGGTTGTCTTCGGAATCGGACACAGTAGTGTTCCCTTTTTGTCGCGTAGTTTGTCTTCCGTTTATCCCTCTGATCATCAAAACCCGATTTCCAATTCTTGCTCTTCTGTATCTGGACCGTTGAAAAGATCAAAACTTGGTGAAGAAAATGAGGATTTGGGAAGTGGGTTTTTTGAGTCTAATTGCAAGGTGTTGAAGTTGAAGGGTGATGGTGATACTTTGGGTGCTTCAGCTTTGGCTTTGCACTATGCAAACTTGGTGATGGTGTTGGAGAAGATGATAAAGTCACCCCAGTTGGTTGGGGTGGAAGCTAGGGATGATTTGTATGGGATGTTGCCAAGAAGCATAAGGTCATGCTTGAGGGGAAGGTTGAGAGGGGTGGGGTTTTCAGCATGTGATGATCACGTGCTGGCTGCGGAGTGGAGGGATGCATTGGGGAGGATATTGAGGTGGTTGGGACCTTTGGCGCATAACATGATCAAGTGGCAGAGTGAGAGGAGCTATGAGCATCAGAACTTGGTGCCAAAGACCAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAAACAAGGAGAAGACAGAAGCTGCCATCACTGAGCTGCTTGTGGGGCTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACAGCTAAGGCATTGTTTGAATGTACCAACTTTAATGGCTTGTTAAGCTTGCACAAGCCCAGCTAA 1410 0.5064 MALETWLIKVKTALSHSLTKKPSFSSSKPKRVAVLSFEIANVMSKLLHLWQSLSDANVVRLRNDAISLEGVRKLISNDESFLLSLAVAEFADSLRLVADSVSRLSHNCHDPTLRSFFRVLTEFANSGLDPHAWTLTAPKDIETKHRKLQHYVTLTATLHKEIDALTLLESAFKKAHLNADTTTEQHKKLNDLQQKILLQKQEVKNLKERSLWNKNFDGVVLLLARFVFTVLARIKVVFGIGHSSVPFLSRSLSSVYPSDHQNPISNSCSSVSGPLKRSKLGEENEDLGSGFFESNCKVLKLKGDGDTLGASALALHYANLVMVLEKMIKSPQLVGVEARDDLYGMLPRSIRSCLRGRLRGVGFSACDDHVLAAEWRDALGRILRWLGPLAHNMIKWQSERSYEHQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTNFNGLLSLHKPS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1630 469 PANTHER DUF3475 DOMAIN PROTEIN 1 468 - -
Gso16g1630 469 Pfam Domain of unknown function (DUF3475) 34 89 IPR021864 GO:0045927
Gso16g1630 469 PANTHER BNAC09G50660D PROTEIN 1 468 - -
Gso16g1630 469 Coils Coil 189 209 - -
Gso16g1630 469 Pfam Protein of unknown function (DUF668) 307 395 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1630 Gso-Chr16 36963643 36965913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1630 - - gmx:100801628 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1630 16 36963643 36965913 Gso9g1260 9 36056854 36059236 GST
Gso16g1630 16 36963643 36965913 Gso10g1619 10 42732058 42734344 PCT
Gso10g1619 10 42732058 42734344 Gso16g1630 16 36963643 36965913 PCT