Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1619 ATGGCCCTCGAGACGCTCCTCGTGAAGGTCAAAACCGCCATATCAAACAGCATCGACTCGGTTCCGCCGAAGCTCCTGAAGAAGAAACCTTCTTTCAAAGCGAAGCAGAACGTCGGCGTTCTGGCATTCGAGATCGGCGGCGTGATGTCGAAGCTCCTCCACCTCTGGCACTCGCTCTCCGACGCCACCATCGTGCGCGTCCAAAACGATGCCTTGAACCTCGAGGGCGTGCGGAAGATCATCTCCAACGACGAGTCGTTCCTCCTCGGACTCGCCTGCGCCGAGTTCGCCGAGTCGCTCCGAGTCGCGGCCAACTCGGTGACGCGGCTCAGCGCGCGCTGCGAGGACCCCGCCCTGCGCTCCTTCCACTGGGCCTTCCTCGAGTTCGCGGACTCGGGCCGCGACCCGAACATGTGGGCCCTCTCCGGCCCAAAAGATACCGATTCGAAGCTCAAGAAAATGGAGCGTTACGTGACCCTCACGGCAACACTCTACCGCGAAATGGAGGAGCTCACGGTTCTGGAAAACTCCTTCAGAAAAGCCCTGAATCACGCTGACGGCAACAGCAAAGATCAGCAGAAACTCTACGAGCTTCAGCAGAAGATCTTTTGGCAGAAGCAAGAGGTGAAGGATCTAAAAGAAAGATCTTTATGGAGCAGAAGTTTCGACAGTGTTGTTGTACTCCTCGTGAGGTTCAGCTTCACCGTTTTAGCAAGGATTAAGGTTGTCTTCGGAATCGGTCGCCACATGCCTTGTCTATCTTGTACTTTGTCGGCTTCCGCCACTGTTTATCCATCTGACCAAAACCCTAATGGGTTTGTTTATGAGTCATTGGAAGAAGAAGAAGATTTGAAGCTTGAAGAAGAAGAGGCGAATGGGTTTTTTGCGGCAAACTCGAAGCTTTTGAGGCCACCCGAGAGCACGTTGGGGGCTTCGGGTTTGGCTTTGCATTATGCGAATCTGATCATAGTGATGGAGAAGATGATAAAGTCACCGCACTTGGTTGGTGTGGATGCGAGGGATGATTTGTATGGGATGTTGCCGAGGAGCATAAGGTGGGGTTTGAGGGGAAGATTGAGAGGGGTGGGGTTTTGTGCAAGTGATCCTGTTTTGGCTGGTGAATGGAGAGATGCGTTAGGGAGAATATTGGGGTGGTTGTCACCTTTGGCACATAACATGATCAAGTGGCAAAGTGAGAGAAGCTTTGAGCAACACAATTTGGTGCCCAAGACTAATGTGTTGCTGTTGCAGACTTTGTTCTTTGCTAACAAGGACAAGACTGAGGCTGCCATCACTGAACTGCTTGTGGGGTTGAACTATATTTGGAGGTTTGAGAGAGAAATGACTGCTAAGGCTCTGTTTGAATGCGCCAATTCTAATGGGTTATTGTTAAAGTTGAACAAACCCAGTCAATGA 1416 0.5148 MALETLLVKVKTAISNSIDSVPPKLLKKKPSFKAKQNVGVLAFEIGGVMSKLLHLWHSLSDATIVRVQNDALNLEGVRKIISNDESFLLGLACAEFAESLRVAANSVTRLSARCEDPALRSFHWAFLEFADSGRDPNMWALSGPKDTDSKLKKMERYVTLTATLYREMEELTVLENSFRKALNHADGNSKDQQKLYELQQKIFWQKQEVKDLKERSLWSRSFDSVVVLLVRFSFTVLARIKVVFGIGRHMPCLSCTLSASATVYPSDQNPNGFVYESLEEEEDLKLEEEEANGFFAANSKLLRPPESTLGASGLALHYANLIIVMEKMIKSPHLVGVDARDDLYGMLPRSIRWGLRGRLRGVGFCASDPVLAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQHNLVPKTNVLLLQTLFFANKDKTEAAITELLVGLNYIWRFEREMTAKALFECANSNGLLLKLNKPSQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1619 471 PANTHER SIMILARITY TO UNKNOWN PROTEIN 1 460 - -
Gso10g1619 471 Pfam Protein of unknown function (DUF668) 308 395 IPR007700 GO:0045927
Gso10g1619 471 PANTHER BNAC09G50660D PROTEIN 1 460 - -
Gso10g1619 471 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1619 Gso-Chr10 42732058 42734344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1619 - - gmx:100779328 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1619 10 42732058 42734344 Gso10g1619 10 42732058 42734344 ECH
Gso16g1630 16 36963643 36965913 Gso10g1619 10 42732058 42734344 PCT
Gso9g1260 9 36056854 36059236 Gso10g1619 10 42732058 42734344 PCT
Gso10g1619 10 42732058 42734344 Gso16g1630 16 36963643 36965913 PCT
Gso10g1619 10 42732058 42734344 Gso9g1260 9 36056854 36059236 PCT