Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1489 ATGGCATTGGCTCTTACTCCAACAGTTGTCTTTGGCTCAATAGCCTTTGCAGTTTTCTGGGTTCTAGCAGTTTTCCCATGTGTGCCTTTTCTACCCATTGGGAGAACTGCAGGGTCCCTACTAGGTGCAATGTTTATGGTCATATTCAAAGTTCTTAATCCAGATCAAGCTTTTGCTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACAATGGTTGTTACTGTTTTTCTTGAAAGAGCAGACATGTTCAAGTACTTGGGGAAATTGCTCTCTTGGAAAAGCCAAGGACCAAAGGACTTACTCTGTAGAATTTGTTTAATTTCAGCTATATCAAGTGCCTTTTTCACCAATGACACATCTTGTGTTGTATTGACTGAATTTGTGTTGAAAATAGCAAGGCAACATAACCTCCCACCTTACCCTTTCCTTCTTGCACTAGCTTCAAGTGCTAATATTGGATCCTCAGCAACCCCAATTGGGAACCCCCAGAATCTAGTTATAGCTATTCAAGGTAAAATATCATTTGGGAGCTTTCTCACTGGTATTCTTCCAGCTATGCTTGTAGGAGTTGTGGTGAATGTTGTAATTCTTATAGCCATGTATTGGAAGGTGTTAACTATTCATAAGGATGAAGAGGATCCAATTTCAGAAGTTGCTGAAGAGGAGTTTGTTTCCCATCAGTTTTCTCCAGCCACAATGTCACATTGTGCATCCTTTAATTCTCATGAATGCAATGACAGTCTAGAACCTACTAATGGTCTTCAAAACCCTTCTCAAGTACATCCTATCAGAAACCAAACAACTCCAAGTGTAACTGAAGTTCAGATGGTTCTTAGTAGCACAAAGGATTCCACAACAAATGCATCCAAGATGGGGACAAATGATGCAAAGGAGGAAACTAATCCTTCAAAAGTTGTTGCAATAGTAGTAGATAAACCTATAGAAGCACATGTTATGCACTCTTCACAAGGAAAGGTGGACTATTTGAGAAAAAAATGGAAAAGGATAGTGTGGAAATCTTGTGTTTATGCAATCACGTTGATAATGGTGATTGCAATGCTTCTTGGTGCAAATATGGCATGGGCTGCAATTGCAGCTGCAATAACTTTGGTGGTTCTTGATTTCAAAGATGCAGGGCCAAGCATAGACAAGGTCTCTTATTCACTGTTGATATTCTTTTGTGGAATGTTTATCACAGTAGATGGATTCAAGAAAACTGGAATTCCAGGTGCTCTTTGGGACTTAATGGAGCCTTATTCTCGAATAGATCATGCTAGTGGAATAGCTATACTGGCTATAGTTATACTTCTTCTATCAAATTTGGCTTCAAATGTACCAACTGTTCTATTGCTTGGAGCACGAGTTGCAGCCTCAGCTGCTACTGTTTCCAAAGAAGATGAGAAGAGAGCATGGCTAATCTTGGCTTGGGTGAGCACCATAGCAGGGAACTTTTCACTATTAGGATCAGCTGCAAACTTGGTAGTGTGTGAACAAGCTCGCAAAGCTCCAAACATTGGATACACGTTAACCTTTTGGACCCACCTAAAATTTGGCCTTCCTTCCACTCTTATAGTCACTGCTATTGGGTTGACACTCATAAAATGA 1611 0.4016 MALALTPTVVFGSIAFAVFWVLAVFPCVPFLPIGRTAGSLLGAMFMVIFKVLNPDQAFAAIDLPILGLLFGTMVVTVFLERADMFKYLGKLLSWKSQGPKDLLCRICLISAISSAFFTNDTSCVVLTEFVLKIARQHNLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGSFLTGILPAMLVGVVVNVVILIAMYWKVLTIHKDEEDPISEVAEEEFVSHQFSPATMSHCASFNSHECNDSLEPTNGLQNPSQVHPIRNQTTPSVTEVQMVLSSTKDSTTNASKMGTNDAKEETNPSKVVAIVVDKPIEAHVMHSSQGKVDYLRKKWKRIVWKSCVYAITLIMVIAMLLGANMAWAAIAAAITLVVLDFKDAGPSIDKVSYSLLIFFCGMFITVDGFKKTGIPGALWDLMEPYSRIDHASGIAILAIVILLLSNLASNVPTVLLLGARVAASAATVSKEDEKRAWLILAWVSTIAGNFSLLGSAANLVVCEQARKAPNIGYTLTFWTHLKFGLPSTLIVTAIGLTLIK* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1489 536 PANTHER TRANSPORTER ARSB-RELATED 1 536 - -
Gso16g1489 536 Pfam Citrate transporter 27 483 IPR004680 GO:0016021|GO:0055085
Gso16g1489 536 PANTHER TRANSPORTER ARSB-RELATED 1 536 - -
Gso16g1489 536 CDD YbiR_permease 28 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1489 Gso-Chr16 35112115 35116584 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1489 - - gmx:100792256 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1489 16 35112115 35116584 Gso9g1106 9 31929441 31936758 GST
Gso16g1489 16 35112115 35116584 Gso10g2079 10 47763794 47771413 PCT