Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2079 ATGGCACTGGCTTCTGTTCCAAAAGTGGTGTTTGGTTTAATTGCATTTGCAATCTTTTGGGTGCTAGCAGTTTTCCCAGCTATTCCATTTCTACCTATTGGGAGAACTGCAGGGTCCCTTCTTGGTGCCATGCTTATGGTCATATTCCAAGTTATTACTCCAGATGAAGCTTATGACACAATTGATCTTCCAATTCTTGGTCTTCTTTTTGGGACAATGGTTGTGAGTACTTATCTTGAAAGAGCAGACATGTTTAAGTATATAGGGAAGTTGCTGGCTTGGAAAAGTAGAGGTGCAAAGGACTTGCTTTGTAGGATTTGTGTTATCTCTGCTATCTCAAGTGCTCTTTTCACAAATGACACATCTTGTGTTGTTTTAACTGAATTCATATTGAAGATTGCAAGGCAGCATAACCTCCCTCCAACACCCTTCCTACTTGCCCTTGCTTCAAGTGCTAATATTGGATCCTCAGCAACTCCAATTGGCAACCCTCAAAACCTGGTTATAGCTGTTCAGAGTAAGATATCATTTGGGAATTTTCTGATTGGTATTCTTCCTGCTATGGTGGCAGGAGTTGTAGCAAATGCTATAATTCTCCTAATAATGTTTTGGAAGTTGTTATCTGTTCATAAGGATGAAGAAGATGCAGGTGCAGAAGATGTGGTAGAGGAGTATGATTCCCATCGGTTTTCTCCGGCCACAATGTCTCATTATTCATCCTTGAATTCTCAAGAATGGAGTTCCCATCTTGATGCTATTACTGTTCAGAACTCTCCTCAGGTTCAGATTCTAAGAAACCGGTCAATTGCAAATGCAAGTGAAAGTAATGGGATTTCTAGCAACACTTTTGATACTGCAAGAATCTCAAGTGTATCAAGGGATGGAACAAATGGTGTGGCATCTATGGCAAAGGAGGAAACTAGCCCTTCAAATTCGTCAGCAGGAGTAGATACACTTATTCCCCCTTCAGAAAGAAAAACCAATTTTATCATAAAATGGAAAAGGGTACTGTGGAAATCTTGTGTTTACATCATCACAGTTGGAATGCTGGTTGCTTTACTTCTAGGTTTAAATATGTCATGGACTGCAATTACTGCTGCACTTGCTCTCATAGTTCTTGATTTCAAAGATGCTACACCATGTTTAGAGAAGGTTTCGTATTCACTTTTGATATTCTTTTGTGGAATGTTTATTACAGTGGATGGCCTCAATAAAACTGGAATTCCAAGTGCTCTGTGGGACATAATGGAGCCCTATTCTCATGTTGATCGTGCTAGTGGAATTGCAATACTTGCAATTGTCATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACAGTTCTCTTGCTTGGAGGAAGGGTAGCAGCCTCAGCTGCTGCAATTTCCAAAGCAGATGAGAAGAAGGCATGGCTGATATTGGCTTGGGCCAGCACCATATCAGGGAATCTCTCATTGTTGGGATCAGCTGCTAACTTGATAGTGTGTGAACAGGCGATCCGTGCGCCAAACCTACCATACACATTAACCTTCTGGAGTCACCTGAAATTTGGCCTTCCTTCCACAATCATAGTCACTGCTATTGGTTTGACATTCATAAGATGA 1605 0.4081 MALASVPKVVFGLIAFAIFWVLAVFPAIPFLPIGRTAGSLLGAMLMVIFQVITPDEAYDTIDLPILGLLFGTMVVSTYLERADMFKYIGKLLAWKSRGAKDLLCRICVISAISSALFTNDTSCVVLTEFILKIARQHNLPPTPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGNFLIGILPAMVAGVVANAIILLIMFWKLLSVHKDEEDAGAEDVVEEYDSHRFSPATMSHYSSLNSQEWSSHLDAITVQNSPQVQILRNRSIANASESNGISSNTFDTARISSVSRDGTNGVASMAKEETSPSNSSAGVDTLIPPSERKTNFIIKWKRVLWKSCVYIITVGMLVALLLGLNMSWTAITAALALIVLDFKDATPCLEKVSYSLLIFFCGMFITVDGLNKTGIPSALWDIMEPYSHVDRASGIAILAIVILVLSNLASNVPTVLLLGGRVAASAAAISKADEKKAWLILAWASTISGNLSLLGSAANLIVCEQAIRAPNLPYTLTFWSHLKFGLPSTIIVTAIGLTFIR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2079 534 CDD YbiR_permease 28 533 - -
Gso10g2079 534 PRINTS Arsenical pump membrane protein signature 109 133 IPR000802 GO:0015105|GO:0015700|GO:0016021
Gso10g2079 534 PRINTS Arsenical pump membrane protein signature 182 205 IPR000802 GO:0015105|GO:0015700|GO:0016021
Gso10g2079 534 MobiDBLite consensus disorder prediction 294 317 - -
Gso10g2079 534 PANTHER TRANSPORTER ARSB-RELATED 1 534 - -
Gso10g2079 534 Pfam Citrate transporter 27 480 IPR004680 GO:0016021|GO:0055085
Gso10g2079 534 PANTHER TRANSPORTER ARSB-RELATED 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2079 Gso-Chr10 47763794 47771413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2079 - - gmx:100781849 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2079 10 47763794 47771413 Gso10g2079 10 47763794 47771413 ECH
Gso16g1489 16 35112115 35116584 Gso10g2079 10 47763794 47771413 PCT
Gso9g1106 9 31929441 31936758 Gso10g2079 10 47763794 47771413 PCT
Gso10g2079 10 47763794 47771413 Gso16g1488 16 35099176 35106436 PCT
Gso10g2079 10 47763794 47771413 Gso9g1105 9 31883408 31890136 PCT