Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1486 ATGCTCCCTTTCGCGCATCCGAATCCCACCATGGGAAGCCGCAACAACAACAACAACAACGCCACCGCCGAGACGGTTTTCGCCGCCGCCAACGCCATCGTCGCCGCCGAATCCAGAGTCCAACCCACCGACGCGCCGAAAAAACGTTGGGGAGGCTGCTGGAGCCAATATTGGTGTTTTGGATCTCGTAAGAGCAGTAAAAGCAGCAAGCGAATTGGCCATGCCGTCCTTGTTCCAGAACCTGCTGCTCCAACAGGTCCAGCTGCTGCTGCTACTGCAGCTGCACCAAATCCTTCAACCGCCATTGTAATGCCGTTCATTGCCCCTCCATCTTCTCCTGCATCTTTTCTCCAATCTGATCCACCATCTGGTATTCAATCACCACCTGGATTACTTTCACTCTCTGCTCTTGCGGCCAATGCTTACTCTTCTGGTGGTCCTGCAACCATGTTCACCATTGGTCCATATGCCTATGAGACCCAGTTAGTTTCTCCACCTGTATTTTCAGCCTTCACAACTGAACCATCCACTGCTCCATATACTCCCCCACCTGAATCTGTGCAGCAAACGACACCTTCGTCCCCTGACGTTCCATTTGCTCAATTGTTGGCATCTTCACTGGACCGGGCTCGCAAGTGTAATGGGCATCAGAAGTTTCCATTATACAATTATGAATTTCATCCTTATCAACAATATCCTGGAAGCCCAGGTGGCCAGCTCATATCACCCGGATCAGCATTTTCAACTTCTGGCACCTCAACCCCATTCCCTGATAGACCCCCTACTCTTGAATTCCCCAAAGGGGAAACACCAAAGATCTTGGGTGTTGAACACTTCTCCACCCGAAGATGGGGTTCTAGACTGGGATCTGGATCATTGACGCCAGACAGTGCATGGCAAGGTTCAAGACTAGGTTCGGGATCCTTGACTCCTGATGGTGTTGGGCTTGCTTCGCGATTAGGCTCTGGGTGTGTGACACCTGATGGTCTGGGGCAGGAATCCAGGTTAGGTTCTGGCTGTTTGACACCTGACAGTGCTGGGCCAACCAATCAAAACAACATCTCTGTGCAAAACCAGATTTCTAAGGAAGCAACTCTTGCAGATTCAGACAATGGACATCCAAGCAATGCAACATTGGTTGATCACAGAGTTTCATTTGAATTAACCGGGGAAGATGTTGCCCGGTGTCTTGCAAATAAAACTGGGGTATTGCTTCGAAACATGTCAGGGTCTTCACAAGGTATACTGACCAAAGACCCTGTTGACAGAGAAAGGGTGCAAATAGACACCAATAGTAGCTGTAACGCGTGTACAGAGAAAACTGACGATAAGCCTGACAATCCTGTAGGAAAAGGAGAGCAATGCCTTCACAAGCAAAATTCTGTAAATTCTTCCAAAGAATTCAATTTTGACAACAGGAAAGGTGATGTTTCTGTTACTACTGGCAGTGGCTATGAGTGGTGGACTAACAGGAAGGTTGCTGGGAAGGAAGGTAGATCAGCCAACAGCTGGGCTTTCTTCCCAATGTTACAGTCAGAAATGAATTGA 1548 0.4884 MLPFAHPNPTMGSRNNNNNNATAETVFAAANAIVAAESRVQPTDAPKKRWGGCWSQYWCFGSRKSSKSSKRIGHAVLVPEPAAPTGPAAAATAAAPNPSTAIVMPFIAPPSSPASFLQSDPPSGIQSPPGLLSLSALAANAYSSGGPATMFTIGPYAYETQLVSPPVFSAFTTEPSTAPYTPPPESVQQTTPSSPDVPFAQLLASSLDRARKCNGHQKFPLYNYEFHPYQQYPGSPGGQLISPGSAFSTSGTSTPFPDRPPTLEFPKGETPKILGVEHFSTRRWGSRLGSGSLTPDSAWQGSRLGSGSLTPDGVGLASRLGSGCVTPDGLGQESRLGSGCLTPDSAGPTNQNNISVQNQISKEATLADSDNGHPSNATLVDHRVSFELTGEDVARCLANKTGVLLRNMSGSSQGILTKDPVDRERVQIDTNSSCNACTEKTDDKPDNPVGKGEQCLHKQNSVNSSKEFNFDNRKGDVSVTTGSGYEWWTNRKVAGKEGRSANSWAFFPMLQSEMN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1486 515 MobiDBLite consensus disorder prediction 287 306 - -
Gso16g1486 515 MobiDBLite consensus disorder prediction 174 194 - -
Gso16g1486 515 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 19 514 - -
Gso16g1486 515 MobiDBLite consensus disorder prediction 244 269 - -
Gso16g1486 515 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 19 514 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1486 Gso-Chr16 35059839 35064202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1486 - - gmx:100806399 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1486 16 35059839 35064202 Gso9g1104 9 31854283 31858765 GST
Gso16g1486 16 35059839 35064202 Gso10g2078 10 47756146 47759910 PCT
Gso10g2078 10 47756146 47759910 Gso16g1486 16 35059839 35064202 PCT