Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2078 ATGGGAACCGTTAACAACACCGTCGACACCGTGAATGCTGCGGCCTCCGCCATCGTCTACGCTGAATCCAGAATCCAACCCACCACCACCGTCCCGAAAAAACGCTGGGGAAGCTGCTGGAGCTTATGTTGGTGTTTTGGACCTCATAAAAACAGCAAGAGAGTGGGCAATGCTGTCCTTGTTCCTGAACCTGTTGAACCTATAGGCCCAGTTGGATTTCATCCTGCTACTGCTGCACCAAATCCTTCAACTGCTATTGTAATGCCATTCATTGTCCCTCCCTCTTCACCTGCATCTTTTCTCCAATCTGATCCTCCATCTGCTACTCAATCACCGGTTGGATTATTCTCCCTCAGTTCTCTCACTGTTAATGCTTCTGGTGGACCTGCATCCATTTTTGCCATAGGCCCTTACACCTATGAGACTCAGTTAGTCTCGCCACCTGTATTTTCTACCTTCACAACTGAACCATCTACTGCTCCGTTCACTCCACCACCTGAATCTGTGCAGCTGACAACACCATCATCCCCTGAGGTGCCATTTGCTCAATTGCTGGCATCTTCTTTAGATCGGAATTGTAAAAGTAATGGTACAAATCAGAGGTTTGCATTATCCAATTATGAGTTTCAGCCTTATCAACAATATCCAGGGAGTCCTGGCACCCAACTCGTATCACCCAGATCAATCATTTCTACTTCTGGCAGTTCTACTCCTTTCCCTGATAGACACCCAGTTCTTGAATTCCACAAAGGGGAAGCACCAAAGCTCTTGGGCTTTGAAAACTTCTTGACACATAAATGGAATTCAAGGCTTGGATCTGGGTCTTTGACGCCAGATAGTGCAGGGCAAGGTTCAAGACTAGGTTCAGGATCTTTCACACCTGATGCTGTTAAGCTAGCTTCACAATTAGGCTCTGGGTGTTTGACACCTGATGGTTTGTGTCAGGACTCAAGGTTCGGTTCTGGATCTTTGACACCTGATGCTGTAGCACCAACTGCTAGAAATGACATTGATATAGGAAAACAGATTTCTGAGGTAACATCCATTGTGAATTCAGAGAATGAGTGTCAACCCAAGGCAGCATTAGTTGATCACAGAGTTTCATTTGAATTAACTGGGGTAGATGTTCCACGATGTCTAGCAAATAAATCAGGGTCTTCATTGCTTGGAAACATGTCAGGGTCTTCTCAGGGTACACTGGTTGAAGACCCCGTTGACATAGAAAAGATACAAAAAAACTCCAATAGTAGTTGTGCTTTCTGTTCAAGGAAAACTTCAAATGCTTCAAATGATAAGTCTTGCAATTCTCCTGGAGAAGGAGCGGAACAGTGCTGTCGAAAGCATCACTCTTTTAATTCTTCCAAAGAATTTAACTTTGACAACAGAAAAGGTGTTGTTTCTGATACTCCTGCCAATAGCTCCAATTGGTGGACTAATAAAAAGATAGTTGGAAAGGAAGGTAGATCAAGCAACAGTTGGACATTCTTCCCAATGCTACAGTCAGAAATCATTTAA 1515 0.4416 MGTVNNTVDTVNAAASAIVYAESRIQPTTTVPKKRWGSCWSLCWCFGPHKNSKRVGNAVLVPEPVEPIGPVGFHPATAAPNPSTAIVMPFIVPPSSPASFLQSDPPSATQSPVGLFSLSSLTVNASGGPASIFAIGPYTYETQLVSPPVFSTFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLASSLDRNCKSNGTNQRFALSNYEFQPYQQYPGSPGTQLVSPRSIISTSGSSTPFPDRHPVLEFHKGEAPKLLGFENFLTHKWNSRLGSGSLTPDSAGQGSRLGSGSFTPDAVKLASQLGSGCLTPDGLCQDSRFGSGSLTPDAVAPTARNDIDIGKQISEVTSIVNSENECQPKAALVDHRVSFELTGVDVPRCLANKSGSSLLGNMSGSSQGTLVEDPVDIEKIQKNSNSSCAFCSRKTSNASNDKSCNSPGEGAEQCCRKHHSFNSSKEFNFDNRKGVVSDTPANSSNWWTNKKIVGKEGRSSNSWTFFPMLQSEII* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2078 504 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 503 IPR040420 -
Gso10g2078 504 MobiDBLite consensus disorder prediction 156 175 - -
Gso10g2078 504 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2078 Gso-Chr10 47756146 47759910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2078 - - gmx:100798631 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2078 10 47756146 47759910 Gso10g2078 10 47756146 47759910 ECH
Gso16g1486 16 35059839 35064202 Gso10g2078 10 47756146 47759910 PCT
Gso9g1104 9 31854283 31858765 Gso10g2078 10 47756146 47759910 PCT
Gso10g2078 10 47756146 47759910 Gso16g1486 16 35059839 35064202 PCT
Gso10g2078 10 47756146 47759910 Gso9g1104 9 31854283 31858765 PCT