Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1421 ATGGAAAACAACATAAACATTGAAATTGAAGAACAAGGCTCTCCTGAAGTTCCATCACTCATAAGGTATATATCATCAAGTGATGTTGCGGGCTTTGACACTGCTGACTCTCAACCTCCCAGCCCATATACCCAAGGAAGTGAAGAAACCTCACCAAGAAGACAACATGATGAACCTGTAGTCATCAATCATCAAAGGAAGTATTCTATCAGCATGCCACTTTCTTCTGAACAAGTTCAGCTTCAACCACTGGACAACAAAACAAATGGTATTCCCATTTCCTCTTCTCAATCAGGAACTGCTAACTCCAACCATCCACAGGCATCAAAATGTTACTCTCAACCAATGCCAAAAGGCTATGTGCCCCAAGAGGCAGATAATGGAGTCAAAATAGATAACCATCCTGGCATCAAAGCATTCAAGGACAAGAGGTTTGATTCTTTTAAAACATGGTCTGGAAGACTTGAGAGACAATTAACAATTCTACGTGGAAAGTCACCCAGAGCAACTGCACAAGATGGTAACAACAACTCCAGTAGTACTGATAGGCCTTTACCTGTGGATCGGTATTTTGATGCATTGGAAGGTCCAGAGTTAGAAACTCTCAGGGCTTCAGAAGAGACAGTGCTTCCTCAGGACAAGCAATGGCCATTTCTTCTTCGGTTTCCTATTTCATCCTTTGGTATATGCCTTGGAGTTAGCAGCCAAGCAATTCTCTGGAAAGCACTGGCCACATCTCCTTCCACTCAATTTCTTCACATAAGCCTCAAAGTCAACTTAATCTTATGGTTCATATCAATTGCTCTTGTTACCACAGTTTTCACCATCTATCTTCTAAAAATCATTCTCTACTTTGAAGCAGTTCGTCGTGAGTACTACCATCCAATCCGTGTCAACTTCTTCTTTGCACCATGGATAGCTCTCTTGTTCTTGGCTCTTGGAGTTCCACCATCAGTTACCAAAGACTTGCACCAAGTTCTTTGGTACATTCTAATGACACCAATATTGTGTCTTGAACTTAAGATCTATGGACAGTGGATGTCTGGGGGCCAGAGGAGGCTCTCTAAGGTGGCCAATCCAACAAACCATTTATCAATTGTTGGAAACTTTGTAGGGGCATTACTTGGGGCTTCAATGGGCCTAAAAGAAGGGCCCATTTTCTTCTTTGCTATTGGTCTAGCCCACTACACTGTCATGTTTGTAACTCTCTACCAGAGACTTCCAACAAATGAGACCCTCCCAAAAGAGCTCCATCCTGTGTTCTTTCTGTTTGTTGCAGCACCTAGTGTTGCTTCTATGGCATGGGCCAATATTCAGGGTTCTTTTGATTATGGATCTCGAATTGCCTATTTCATTGCCCTCTTCCTTTATTTTTCATTGGCTGTCCGGATCAATTTTTTCAGAGGATTCACATTCTCTCTTGCATGGTGGGCCTATACTTTTCCAATGACTGGTGCAGCAATTGCAACCGTAAGATACTCAAATCGGGTCACAAATCCAGTTACCAAGACACTGTGTGTCATACTGAGTCTCATCTCCACACTCATAGTAATAGCTTTGCTTGTATCAACTATATTGCATGGCTTTGTCTTCAGAAACCTCTTCCCCAATGACCTTGCCATTGCCATAAGTTACAGAAAGAGAAGGCCACAAAAGAAGTGGCTAGGTCTTAGATACAGGAGCCATGATTCCAAAGAGATTGAAAATTACTTGAAGTTTGTGAACTCGGATAAAATTGATTTAGAAGCTTCTGCCCCACTACCAAATGGCACAGAAGATACTCCATCTATCTGA 1794 0.4208 MENNINIEIEEQGSPEVPSLIRYISSSDVAGFDTADSQPPSPYTQGSEETSPRRQHDEPVVINHQRKYSISMPLSSEQVQLQPLDNKTNGIPISSSQSGTANSNHPQASKCYSQPMPKGYVPQEADNGVKIDNHPGIKAFKDKRFDSFKTWSGRLERQLTILRGKSPRATAQDGNNNSSSTDRPLPVDRYFDALEGPELETLRASEETVLPQDKQWPFLLRFPISSFGICLGVSSQAILWKALATSPSTQFLHISLKVNLILWFISIALVTTVFTIYLLKIILYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKDLHQVLWYILMTPILCLELKIYGQWMSGGQRRLSKVANPTNHLSIVGNFVGALLGASMGLKEGPIFFFAIGLAHYTVMFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWANIQGSFDYGSRIAYFIALFLYFSLAVRINFFRGFTFSLAWWAYTFPMTGAAIATVRYSNRVTNPVTKTLCVILSLISTLIVIALLVSTILHGFVFRNLFPNDLAIAISYRKRRPQKKWLGLRYRSHDSKEIENYLKFVNSDKIDLEASAPLPNGTEDTPSI* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1421 597 MobiDBLite consensus disorder prediction 85 114 - -
Gso16g1421 597 Gene3D - 218 535 IPR038665 -
Gso16g1421 597 MobiDBLite consensus disorder prediction 1 62 - -
Gso16g1421 597 CDD TDT_SLAC1_like 221 524 - -
Gso16g1421 597 Pfam Voltage-dependent anion channel 222 525 IPR004695 GO:0016021|GO:0055085
Gso16g1421 597 PANTHER S-TYPE ANION CHANNEL SLAH3 12 578 - -
Gso16g1421 597 PANTHER - 12 578 IPR030183 GO:0006873|GO:0008308|GO:0016021
Gso16g1421 597 MobiDBLite consensus disorder prediction 163 185 - -
Gso16g1421 597 MobiDBLite consensus disorder prediction 85 111 - -
Gso16g1421 597 MobiDBLite consensus disorder prediction 30 49 - -
Gso16g1421 597 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1421 Gso-Chr16 34197626 34202771 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1421 - - gmx:100816885 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1421 16 34197626 34202771 Gso9g1034 9 29522417 29527045 GST
Gso16g1421 16 34197626 34202771 Gso10g2048 10 47482674 47486390 PCT
Gso10g2048 10 47482674 47486390 Gso16g1421 16 34197626 34202771 PCT