Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2048 ATGGAAAACAACCTTAACCGTGAAACAGAAGGGCATGGCTTGCCTAAAATTCCATCACTAGTTCAACATATATCATCAAATGATGAAGGAAACTTTGACAATGGTGACTTGAAAAATCTAAGCTCATCTTTCAAAGAGAATGAAACAATCTTAGCAGGAAGCCAAGGTGATGAACATGCAGCCATTAATCATCGGAATAAGCATTCGGTATCTATCAACATACCATTCTCTTGTGAAGAGGTTCAGCTGCATAACACCGTAAGAGTTCTCTATAGTGGCGAAAATGATTTCTCTTCTCAATCAACTACTACAGACTCCAAGCCACCATTACCATCACAATCAATGCCAAATGGCAGTCTGCACTCAGAGCCAGCAAGCGGTGTCAATTTTAACAATCAAGAAAGCGTCATAAGCTTGAATAATAAGAGGATTGATTTTTTCAAAACATGGTCCAGTAAACTAGGGGGACACATATCAGTTATGAGTGGAAAGGTACATACAGAAAGTGCAGAAGATGATAACAGCTTATGCAACACTAATAAGCCTTTACCTGTTGATTTGTTCTTCAAAACATTGGAGGGTCCACAGTTACAAACTCCTAAGAAGTCTTCAGAAGAGATGGTGCTTCCTCAGGACAAGCAGTGGCCATTTCTTCTTCGGTTTCCGGTTTCATCTTTTGGTATTTGTCTTGGAGTTAGCAGTCAAGCAATTCTTTGGAAAGCATTGGCCACGTCTCCTTCCACTGCATTTCTTCACATAACCCCTAAAATAAATTTCATCCTATGGTTCATCTCCATTGCTATTGTTGCTACTATTTTCACCACCTATCTCTTCAAAATAATTCTCCATTTTGAAGCAGTTCGTCGTGAGTACCAACATCCGGTTCGTGTTAACTTCTTCTTTGCACCATGGATAGCCCTTTTGTTCCTAGCTCTTGGAGTTCCCCCATCAGTTACCAAGGACTTGCATCAAGCAGTTTGGTACATTCTAATGATTCCATTGTTCTGCCTTAAGCTAAAGATATATGGACAGTGGATGTTTGGGGGCAAAAGACTGCTGTCAAAGGTGGCCAATCCAACAAATCTCTTAGCAATTGTTGGAAATTTTGTAGGAGCCTTATTGGGTGCATCAATGGGCCTAAAAGAAGGGCCTCTTTTCTTCTTTGCTCTTGGGCTTGCTCACTACATGGTGTTGTTTGTAACTCTCTCCCAGATGCTTCCAACAAATAAGACCATCCCAAAAGACCTCCATCCAGTGTTCTTTCTTTTTGTGGCACCGCCTAGTGTTGCTGCTATGGCATGGGCTAAGATTCAGGGTTCATTTCATTATGAATCAAGGATTTTCTATTTCACTGCCATGTTCCTATATATTTCACTGGCTGTCCGGGTCAATCTTTTCAGAGGATTCAAATTCTCACTTTCATGGTGGGCCTACACTTTTCCAATGACTGCTGCAGCAATTGCTACCATAACCTATACAAATCAAGTCACAAATGTACTAACTCAAGCTTTGAGTGTAATATTGAGTCTCATTGCTACATTCACAGTAACAGCAGTGCTTGTCTCGACTATAGTGCATGCCTTTGTCCTACGAGACCTCTTTCCCAATGACCTTGCCATTGCCACAAGTGAGAGAAAGCAAAAACCACGCAGGAAATGGCTCCCATTTAAGACTTGGGAGCCATGA 1686 0.4122 MENNLNRETEGHGLPKIPSLVQHISSNDEGNFDNGDLKNLSSSFKENETILAGSQGDEHAAINHRNKHSVSINIPFSCEEVQLHNTVRVLYSGENDFSSQSTTTDSKPPLPSQSMPNGSLHSEPASGVNFNNQESVISLNNKRIDFFKTWSSKLGGHISVMSGKVHTESAEDDNSLCNTNKPLPVDLFFKTLEGPQLQTPKKSSEEMVLPQDKQWPFLLRFPVSSFGICLGVSSQAILWKALATSPSTAFLHITPKINFILWFISIAIVATIFTTYLFKIILHFEAVRREYQHPVRVNFFFAPWIALLFLALGVPPSVTKDLHQAVWYILMIPLFCLKLKIYGQWMFGGKRLLSKVANPTNLLAIVGNFVGALLGASMGLKEGPLFFFALGLAHYMVLFVTLSQMLPTNKTIPKDLHPVFFLFVAPPSVAAMAWAKIQGSFHYESRIFYFTAMFLYISLAVRVNLFRGFKFSLSWWAYTFPMTAAAIATITYTNQVTNVLTQALSVILSLIATFTVTAVLVSTIVHAFVLRDLFPNDLAIATSERKQKPRRKWLPFKTWEP* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2048 561 PANTHER - 9 550 IPR030183 GO:0006873|GO:0008308|GO:0016021
Gso10g2048 561 CDD TDT_SLAC1_like 220 523 - -
Gso10g2048 561 Pfam Voltage-dependent anion channel 221 524 IPR004695 GO:0016021|GO:0055085
Gso10g2048 561 Gene3D - 217 534 IPR038665 -
Gso10g2048 561 PANTHER S-TYPE ANION CHANNEL SLAH3 9 550 - -
Gso10g2048 561 MobiDBLite consensus disorder prediction 96 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2048 Gso-Chr10 47482674 47486390 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2048 - - gmx:100789128 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2048 10 47482674 47486390 Gso10g2048 10 47482674 47486390 ECH
Gso16g1421 16 34197626 34202771 Gso10g2048 10 47482674 47486390 PCT
Gso9g1034 9 29522417 29527045 Gso10g2048 10 47482674 47486390 PCT
Gso10g2048 10 47482674 47486390 Gso16g1421 16 34197626 34202771 PCT
Gso10g2048 10 47482674 47486390 Gso9g1034 9 29522417 29527045 PCT