Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1418 ATGGCTCAGGTCGTGGCTTCACGATCCATTCAAAGCACCCCATTGTGCCCCACTTCTGGATCTGCACGTGACAGAACCCAAAACCTGTTAAAGCCTCCATCTTTTGCTTCCAAGGTGTTCCCTTTGGGAGAGAACAATAACAAACGCTCCAAACTCAGGCTCAGAAGCCTTCAGATCAGTGCAAGGAAATCTGCCCCTTCTGAAGTCATCCCCATGTCACCCGAAGATGATCCAAAAATTGAGGAGCATTTGCAACATTTACGTGGGGTGCAGCCATTTGGTGAGAACTCTGTTGGAATGTGGTCTAAGCCAACGTTTAGGCGCAAGACGAAGATAGTGTGCACCATTGGACCTTCTACCAATACGAGGGAAATGATTTGGAAGCTGGCTGAGGCTGGCATGAATGTTGCTCGGTTGAATATGTCTCATGGGGACCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAGGAGTATAATGCTTCTCATGAAGACAATGTGATTGCAATCATGCTTGACACAAAGGGTCCTGAAGTTAGGAGTGGGGATTTGCCACAACCAATTACATTAATGCCTGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCTGATTGTGTTAGTGTGAACTACGATGATTTTGTGAATGATGTGGAAATGGGGGACATGCTTCTTGTCGATGGTGGTATGATGTCTATGGTTGTTAAGTCTAAGACAGAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGCGACATTTGAACGTTAGAGGAAAAAGTGCAACACTACCTTCAATCACTGAGAAGGATTGGGATGATATCAAGTTTGGAGTGGATAACAAAGTTGACTTCTATGCTGTTTCCTTTGTTAAGGATGCTGAAGTTGTTCATGAACTGAAGAATTATTTGAAGAGCTGCGGTGCTGATATACATGTCATCGTAAAAATTGAAAGTGCAGACTCTATACCAAATTTGCATTCAATTATCACTGCATCTGATGGGGCAATGGTTGCCAGAGGAGATCTTGGCGCTGAGCTCCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACTTGTGTCGTAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGCTAGAAAGCATGATTGTTCACCCAACTCCAACCAGAGCAGAGGTATCAGATATAGCAATTGCAGTTCGTGAAGGTTCTGATGGAATAATGTTGTCTGGAGAAACAGCTCATGGAAAGTTCCCACTAAAAGCTGTGCAAGTAATGCACACAGTAGCATTGCGGACAGAAGCCACTATACCAGGTGGTAAAATGCCACCTAACATTGGTCAAGTGTTGAAGAACCACATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCTAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGAACGGGTTTCATGGCTGTCCTTCTGAGTCACTATCGTCCTTCTGGGACCATATTTGCTTTTACAGATGAGAAGAGGGTACAACAGAGGCTGGCTTTGTATCAAGGAGTCTGTCCCATATACATGGAATTCTGTGATGATTCTGAGGCAACTTTCAGAAGAGCCTTGGATTTGCTGCTGAAGCAAGCAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCCACGCACAATATCCAGGTTAGGAAAGTGTAA 1734 0.4406 MAQVVASRSIQSTPLCPTSGSARDRTQNLLKPPSFASKVFPLGENNNKRSKLRLRSLQISARKSAPSEVIPMSPEDDPKIEEHLQHLRGVQPFGENSVGMWSKPTFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNASHEDNVIAIMLDTKGPEVRSGDLPQPITLMPGQEFTFTIQRGVGTADCVSVNYDDFVNDVEMGDMLLVDGGMMSMVVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVQVMHTVALRTEATIPGGKMPPNIGQVLKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAVLLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCDDSEATFRRALDLLLKQAMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1418 577 Pfam Pyruvate kinase, barrel domain 108 443 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 Gene3D - 178 271 IPR015806 GO:0004743|GO:0006096
Gso16g1418 577 Gene3D - 450 577 IPR036918 -
Gso16g1418 577 SUPERFAMILY PK beta-barrel domain-like 177 268 IPR011037 -
Gso16g1418 577 PANTHER PYRUVATE KINASE 32 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 100 442 IPR015813 GO:0003824
Gso16g1418 577 PANTHER PYRUVATE KINASE 32 577 - -
Gso16g1418 577 ProSitePatterns Pyruvate kinase active site signature. 318 330 IPR018209 GO:0004743|GO:0006096
Gso16g1418 577 PRINTS Pyruvate kinase family signature 166 182 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 PRINTS Pyruvate kinase family signature 290 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 PRINTS Pyruvate kinase family signature 320 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 PRINTS Pyruvate kinase family signature 347 371 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 PRINTS Pyruvate kinase family signature 372 396 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 PRINTS Pyruvate kinase family signature 397 415 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 PRINTS Pyruvate kinase family signature 416 432 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 SUPERFAMILY PK C-terminal domain-like 426 577 IPR036918 -
Gso16g1418 577 MobiDBLite consensus disorder prediction 1 27 - -
Gso16g1418 577 TIGRFAM pyruv_kin: pyruvate kinase 108 576 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Gso16g1418 577 Gene3D - 110 435 IPR040442 -
Gso16g1418 577 Pfam Pyruvate kinase, alpha/beta domain 465 557 IPR015795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1418 Gso-Chr16 34158981 34165351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1418 K00873 - gmx:100815822 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1418 16 34158981 34165351 Gso9g1029 9 29444163 29453024 GST
Gso16g1418 16 34158981 34165351 Gso20g1323 20 43263060 43268352 PCT
Gso16g1418 16 34158981 34165351 Gso10g2035 10 47371611 47376671 PCT
Gso20g1323 20 43263060 43268352 Gso16g1418 16 34158981 34165351 PCT
Gso10g2035 10 47371611 47376671 Gso16g1418 16 34158981 34165351 PCT