Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1312 ATGTCAATGGCATGTTCAATCCCATGCATCAAAATCCCAACATGTTCTTCTTCCCCATCTTGCACTTCATCATCAACTTCATCCTATTCTTTGAGGTTTTCTTCTTCCAAGCCTCACAGTGTCACTATAAGGAATTCTCAAGCTGAAGGGCCTATAAGAAGGCCAGTGGCACCCCCAATAAGAGAACCATCATCATCATCATCAAGTGCCCCTCAGCTTCAGAAGCCAACACTTCCTTCTCAGCCTCCACCATCCCCTTCACCCCCACAGAAGCCAGCTACTGTTGTTGGAGATGATAAGAACGTCATTACGTTGGAGTTTCAGAGGCAAAAGGCTAAGGAGTTGCAGGAATACTTCAAACAGAAGAAGCTTGAACAAGCAGATCAGGGTCCTTTCTTTGGTTTCATCGGGAAAAATGAGATTAGCAATGGAAGATGGGCAATGTTTGGTTTTGCTGTAGGGTTGCTAACAGAGTATGCAACAGGTTCAGACTTTGTTGATCAAGTGAAGATCCTTCTATCGAATTTTGGGATAGTAGATTTGGAATGA 549 0.4372 MSMACSIPCIKIPTCSSSPSCTSSSTSSYSLRFSSSKPHSVTIRNSQAEGPIRRPVAPPIREPSSSSSSAPQLQKPTLPSQPPPSPSPPQKPATVVGDDKNVITLEFQRQKAKELQEYFKQKKLEQADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKILLSNFGIVDLE* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1312 182 MobiDBLite consensus disorder prediction 16 47 - -
Gso16g1312 182 MobiDBLite consensus disorder prediction 76 91 - -
Gso16g1312 182 MobiDBLite consensus disorder prediction 16 96 - -
Gso16g1312 182 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 181 - -
Gso16g1312 182 SUPERFAMILY Chlorophyll a-b binding protein 128 171 - -
Gso16g1312 182 MobiDBLite consensus disorder prediction 61 75 - -
Gso16g1312 182 Gene3D Chlorophyll a/b binding protein domain 92 175 - -
Gso16g1312 182 Coils Coil 105 125 - -
Gso16g1312 182 PANTHER MYB-LIKE PROTEIN U 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1312 Gso-Chr16 32506452 32508134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1312 - - gmx:100527001 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1312 16 32506452 32508134 Gso2g0654 2 6759536 6761259 GST
Gso16g1312 16 32506452 32508134 Gso20g1364 20 43777031 43780437 PCT
Gso16g1312 16 32506452 32508134 Gso10g1988 10 46891044 46893432 PCT
Gso20g1364 20 43777031 43780437 Gso16g1312 16 32506452 32508134 PCT
Gso10g1988 10 46891044 46893432 Gso16g1312 16 32506452 32508134 PCT