Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1988 ATGTCTGTGGCATCTTCATTCCCATGCATCAAAATCCCAGCTTGTTCCTCCTCTCCAACATGCACATCTTCATCAACTTCATCATTTAGATTTTCTTCTTCCAAGCCTTATGCTGCTGTTTCTATAAGGAACTCTCAGACTGAAGGGCCTCTGAGAAGACCAGTGGCTCCTCCTGTGAGAGAACCATCAAGTAGTGTCCCTCAGCCACTGAAGCCTTCACCTCCTTCTCAGGTTCCGCCCCAGAAGGCTTCTCCTGTTGCTGGGGATGATAATAATGTCATTACATTAGAGTTTCAGAGGCAGAAGGCTAAGGAGCTTCAGGAGTATTTCAAACAGAAGAAGCTTGAAGATGCAAATCAGGGTCCTTTCTTTGGATTCATTGGCAAAAATGAGATTAGCAATGGAAGATGGGCAATGTTTGGTTTTGCTGTTGGATTGCTAACAGAGTATGCAACGGGATCAGATTTTGTTGATCAAGTAAAGATCCTTCTCTCGAATTTTGGAATAGTAGATTTGGAATGA 522 0.433 MSVASSFPCIKIPACSSSPTCTSSSTSSFRFSSSKPYAAVSIRNSQTEGPLRRPVAPPVREPSSSVPQPLKPSPPSQVPPQKASPVAGDDNNVITLEFQRQKAKELQEYFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKILLSNFGIVDLE* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1988 173 Gene3D Chlorophyll a/b binding protein domain 80 168 - -
Gso10g1988 173 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 172 - -
Gso10g1988 173 SUPERFAMILY Chlorophyll a-b binding protein 116 162 - -
Gso10g1988 173 MobiDBLite consensus disorder prediction 14 90 - -
Gso10g1988 173 Coils Coil 96 116 - -
Gso10g1988 173 MobiDBLite consensus disorder prediction 14 48 - -
Gso10g1988 173 MobiDBLite consensus disorder prediction 55 81 - -
Gso10g1988 173 PANTHER MYB-LIKE PROTEIN U 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1988 Gso-Chr10 46891044 46893432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1988 - - gmx:100802195 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1988 10 46891044 46893432 Gso10g1988 10 46891044 46893432 ECH
Gso20g1364 20 43777031 43780437 Gso10g1988 10 46891044 46893432 GST
Gso16g1312 16 32506452 32508134 Gso10g1988 10 46891044 46893432 PCT
Gso2g0654 2 6759536 6761259 Gso10g1988 10 46891044 46893432 PCT
Gso10g1988 10 46891044 46893432 Gso16g1312 16 32506452 32508134 PCT
Gso10g1988 10 46891044 46893432 Gso2g0654 2 6759536 6761259 PCT