Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1139 ATGATGCTGAAGGCGGCACCGCGTGCAGTAATCTACTACCTCTCGGAGCACCCGGCTATCGTGGGGTTCCGGTGGAGCCACGCCCAATCATGGGGCGCCACGTGGTCCTTCCTCTTCTCCTCAATTGCCTCCTACCTCTTCCTCTCAGTCTTCCTATACTTCTCTCTTTCTCTCCTCTTCCGCCGCCGTCAAATCCCTCTCGGCCCCCTTCCCGCCGTCCACAGCCTCTCCATGTCCCTCATCTCCGCCACGATCTTCGCCGGCATCCTCCTCTCTGCCGCCGCCGAGATCAGCGACACGCGGTGGTTCTGGCGGCGCTCCAAAACCCCCCTACAGTGGCTCCTCTGCTTCCCCTTGGGCACGCGCCCCTCGGGGCGCGTCTTCTTCTGGTCCTACGTCTACTACCTCTCCCGCTTCCTCCACATGCTCCGCACCCTCCTCAGAATCCTACGCCACCGCAGGCTATCATTTTTTCATCTGTTGAGTAACTCAATCTCCGCACTCGCCTCCTTCCTCTGGCTCGAGTTCTCGCAGTCCTTTCAAGTCCTCGCAATTCTCTTCGCCACGCTCGTGTACGCAGCCGTCTACGGCTACCGCTTCTGGACCGCCATCGGCCTCCGCGGCGCGTGCTTCCCCTTCGTCCTCAGCTGCCAGATCGTGCTCCTCGCCTGCAATGTTGCCTGCCACGTCGCCGTCTTCTTCCTCCACTTCTTCCTCAAGGGCGGGTGCAATGGGATCGGCGCGTGGGTCTTCAACTCAATCCTCAACCTCGCTCTTCTTATGCTCTCTCTTAACTTCTACGTGAGAATGCACGTTCACAAGAGGAGGAGGAAAGTTAGGGATGTTACTGTTACTGTTGCTACTGCACTGTCTTAA 876 0.589 MMLKAAPRAVIYYLSEHPAIVGFRWSHAQSWGATWSFLFSSIASYLFLSVFLYFSLSLLFRRRQIPLGPLPAVHSLSMSLISATIFAGILLSAAAEISDTRWFWRRSKTPLQWLLCFPLGTRPSGRVFFWSYVYYLSRFLHMLRTLLRILRHRRLSFFHLLSNSISALASFLWLEFSQSFQVLAILFATLVYAAVYGYRFWTAIGLRGACFPFVLSCQIVLLACNVACHVAVFFLHFFLKGGCNGIGAWVFNSILNLALLMLSLNFYVRMHVHKRRRKVRDVTVTVATALS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1139 291 PANTHER ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE 9 280 - -
Gso16g1139 291 Pfam GNS1/SUR4 family 34 278 IPR002076 GO:0009922|GO:0016021
Gso16g1139 291 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 9 280 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1139 Gso-Chr16 30329484 30330795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1139 2 256 Acyl Lipid Metabolism Gene Families AT4G36830 65.251 4.91e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1139 - - gmx:121173729 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0496 2 5252057 5253546 Gso16g1139 16 30329484 30330795 GST
Gso11g0542 11 4850195 4851526 Gso16g1139 16 30329484 30330795 PCT
Gso16g1139 16 30329484 30330795 Gso11g0542 11 4850195 4851526 PCT