Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0542 ATGTCCACGTCACCGTCCGGCAGTACCCTCGGTAAGGCCACGGCGGTGATGAAGAGCCTCAACTTCTACCTTTCAGATCACCCCGCAATCGTGACTTTCAGATGGAGTCACGACCTATGCTGGGGTTCCACCTGGTCCTTCCTCTTCTCCTCAATCGCCTTTTACGTCGTCGTTTCGATCTTCCTCCACCTCACATTAGCCTTTCTTCTTCGACGTGGCAGACCCGTTCCGCTGGGACCCATTCCCGCGCTCCACAGCCTCTCGATGTCCGTCATCTCCGCCACCATATTCGCCGGCCTCTTGGTCTCCGCCGCCGCCGAAATCAAAGAGACACGGTGGCTCTGGCGGCGCTACAAGACCCCGCTCCAGTGGCTGCTATGTTTCCCCCTTGGAACGCGTCCCTCTGGTCGTGTTTTCTTCTGGTCCTACGTTTTCTACCTCTCGCGTTTCCTTCACATGTTGAGAACCGTCCTCGTCGTCCTACGACGTCGTAAGCTCGTTTTCTTTCAGCTCTTCTACCACGCGATTTCCACCTTCATGTCTTTCCTGTGGCTCGAGTTCTCGCAATCTTTCCAAGTTCTGGCGATCCTCTTCACCACGCTCGCGTTCTCCGTTATGTACGGCTACCGCTTCTGGACATCAGTGGCGGCGCGTGGCGCGTGCCTGCCACTCGTGCTCAACTGCCAGATTGCGCTGCTTGGGTGCAACTTGGTTTGCCACGTGGCAGTGCTCTTGTTGCATTTTCTAACAGGAGGGTGTAACGGGATTGGCGCGTGGGTCTTCAATTCCGTGCTCAACGGTGCTATTTTGTTGCTGTTTCTTAATTTTTACGTGAGGATGTATTTAGCAAGGAGGAGGAAGCGTAAGGGTGTCGTCATTGATCATCGTTGTGAGAATGATAATAACATTGCTCGCTCCTCTGTCTTGGGCGCTGGAAAAGAACCACATAGTAATAAAGTGAAGTCCAATTAA 972 0.536 MSTSPSGSTLGKATAVMKSLNFYLSDHPAIVTFRWSHDLCWGSTWSFLFSSIAFYVVVSIFLHLTLAFLLRRGRPVPLGPIPALHSLSMSVISATIFAGLLVSAAAEIKETRWLWRRYKTPLQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHMLRTVLVVLRRRKLVFFQLFYHAISTFMSFLWLEFSQSFQVLAILFTTLAFSVMYGYRFWTSVAARGACLPLVLNCQIALLGCNLVCHVAVLLLHFLTGGCNGIGAWVFNSVLNGAILLLFLNFYVRMYLARRRKRKGVVIDHRCENDNNIARSSVLGAGKEPHSNKVKSN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0542 323 PANTHER GNS1/SUR4 MEMBRANE FAMILY PROTEIN 10 313 - -
Gso11g0542 323 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 10 313 IPR002076 GO:0009922|GO:0016021
Gso11g0542 323 Pfam GNS1/SUR4 family 43 288 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0542 Gso-Chr11 4850195 4851526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0542 13 266 Acyl Lipid Metabolism Gene Families AT4G36830 64.591 3.74e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0542 - - gmx:100782066 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0542 11 4850195 4851526 Gso11g0542 11 4850195 4851526 ECH
Gso11g0542 11 4850195 4851526 Gso2g0496 2 5252057 5253546 PCT
Gso11g0542 11 4850195 4851526 Gso16g1139 16 30329484 30330795 PCT
Gso2g0496 2 5252057 5253546 Gso11g0542 11 4850195 4851526 PCT
Gso16g1139 16 30329484 30330795 Gso11g0542 11 4850195 4851526 PCT