Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1132 ATGGCCGCTCCCGCCTCCAACGCTGTGCTCCTCGGAGACGTTCACTTCGACGACGTCGCCGCAAAGCCTTGCGGCGTTCACTTCCGCGGCGAAACGCGGCGAGGCGCGCTCCGAGCCACCGTGAATCTCCGAAAGCCGAAAACGTTGAGCGGTATTCTGAATTTCGGGTGTTCCACATCGGATGCAAGTTGGAGGAGCTGGAATCCGAGTTCGCTCCACAGGAACTCGTCCTTCGCTTGCTGCTCCGCCGAGACAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGATTGACCAGACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCGGGGTCATGTTACCTACCACATCCGGATAAGGAGGACACAGGTGGAGAGGATGCACATTTTATTTGCACAGATGAACAAGCAATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTCTTTGCTCGAGAACTCATGTCTCATTCTGTTAGAGCAATTGAAGAGGAACCCAAAAATTCTATTAATCCGGCTAGGGTTTTAGAGAAGGCTCACTCATGTACAAAGGCCAAGGGTTCATCAACAGCTTGTATCATTACCCTTACTGACACGGGACTACATGCCATTAATTTGGGTGACAGTGGGTTCATCGTGGTTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGGCTTCAATTTTACATATCAACTGGAGAGTGGCAATGGAGGTGATCTACCCAGCTCTGGTGAGGTCTTTACAATACCTGTTGCCCCAGGAGATGTTGTCGTTGCTGGAACAGATGGATTGTTTGACAATCTGTACAATGATGAGGTCACTGAAGTTGTTTTACATTCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGTACTGGCTCGTCAACGAGCACTGGACAGGAATAGGCCGACACCATTTTCTACGGCTGCTCAAGAGGCTGGGTTCCGTTATTATGGTGGCAAACTTGATGACATAACAGTTGTTGTGTCATACATAACCGGCTCAACATGTGTGAGTTTTTCGCCATCTTAG 1089 0.4977 MAAPASNAVLLGDVHFDDVAAKPCGVHFRGETRRGALRATVNLRKPKTLSGILNFGCSTSDASWRSWNPSSLHRNSSFACCSAETTPHVQHLATSTFSIDQTNFGGERLKLFSGSCYLPHPDKEDTGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFARELMSHSVRAIEEEPKNSINPARVLEKAHSCTKAKGSSTACIITLTDTGLHAINLGDSGFIVVRDGCTIFRSPVQQHGFNFTYQLESGNGGDLPSSGEVFTIPVAPGDVVVAGTDGLFDNLYNDEVTEVVLHSVRAGLEPQVTAQKIAVLARQRALDRNRPTPFSTAAQEAGFRYYGGKLDDITVVVSYITGSTCVSFSPS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1132 362 SMART PP2C_SIG_2 125 351 IPR001932 -
Gso16g1132 362 SMART PP2C_4 102 349 IPR001932 -
Gso16g1132 362 Pfam Stage II sporulation protein E (SpoIIE) 139 349 IPR001932 -
Gso16g1132 362 PANTHER PROTEIN PHOSPHATASE 1 355 - -
Gso16g1132 362 PANTHER PROTEIN PHOSPHATASE 2C 1 355 IPR039123 -
Gso16g1132 362 SUPERFAMILY PP2C-like 116 349 IPR036457 -
Gso16g1132 362 ProSiteProfiles PPM-type phosphatase domain profile. 115 351 IPR001932 -
Gso16g1132 362 Gene3D - 254 355 IPR036457 -
Gso16g1132 362 Gene3D - 122 243 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1132 Gso-Chr16 30173446 30177938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1132 K17508 - gmx:100784475 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0489 2 5162046 5164846 Gso16g1132 16 30173446 30177938 GST
Gso11g0558 11 5000672 5003715 Gso16g1132 16 30173446 30177938 PCT
Gso16g1132 16 30173446 30177938 Gso11g0558 11 5000672 5003715 PCT