Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0558 ATGCCTGGCATTCTCTCAAGGCTGAATGCAACCATTTACTGTCGCATTCGGGAAGCAATAACAAGGCAACAAGGAGTGCCGACATCCTTGTACAGAAGTTCAGCTTTGCCTCTTTGTTCGCTCACTTCAAGTCACACACTTCACACAAAATCAATGATTACTGCCTCACATTCCAATGCTATGCTGGGAGATGTTTATGCTTATGGCTTAATCTCAGGTCGTGGTAGTGTGCGAGACTTCACAAAGCCTGCTGTAGGTTGCTTGAGGGGTAGTGTGAATCTAAGGAGACTACAACCATTGTATGGTCCTTTGAGTTTTGGGTGTTCTACTTTTGATGCTAATAGGAGGATCCGGGATTCGAGTTTGCTGCATGGATCATGGCTCAAGAATTTCTCAGCCTCTTCTTCTGCTTGCTACTCAGCCGGGGCTGCACATGCTGTCTCATTTGATGGAAGCCCTCCTGATGAACAGCTTGCAAATTCCTCTTTTTCGCCTGACCCAACTATTGTTGGTGGTAAGCCCTTGAAGATGTTGTCAGGATCTTGTTACCTACCACATCCAGATAAGGAGGAGACAGGAGGAGAGGATGCTCATTTTATTTGCACGGATGAACAAGCAATTGGTGTTGCTGATGGTGTAGGTGGCTGGGCGGATGTTGGCGTTAATGCAGGACTGTTTGCACAGGAACTTATATCCAATTTAGTGAGAGCAATTCAAAAGGAGCCTAAAGGTTCTTTTAATCTGACAAGAGTGTTAAGGGAAGCTCACGCAAATACAAAGGTCAAGGGTTCATCAACAGCTTGTATTGTTGCTCTTACTGACAAGGGACTACATGCTATTAATTTGGGTGACAGTGGATTCATTGTGGTTAGAGATGGATGCACCATTTTCGAGTCCCCTTCTCAACAGCATGACTTCAATTTCCCATATCAGTTGGAGAGTGGGAATGGCGCTGATCTACCCAGCTCTGGTGAGGTTTTTACCATACCCGTTGCTTCAGGAGATGTGGTCATTTCTGGAACAGATGGTTTATTTGACAATTTGTACAACAGTGAGATCACTGGAGTTGTTGAACATGCAATTAGGGCTGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGTCCAAGAGTAGTCGGACACCATTTTCTACTGCTGCTGAAAAAGCTGGATTCTGTTATTATGGTGGCAAACTTGATGACATAACTGTTGTTGTCTCATACATATCAGGTTCAGTGAGTGAGTGA 1272 0.4513 MPGILSRLNATIYCRIREAITRQQGVPTSLYRSSALPLCSLTSSHTLHTKSMITASHSNAMLGDVYAYGLISGRGSVRDFTKPAVGCLRGSVNLRRLQPLYGPLSFGCSTFDANRRIRDSSLLHGSWLKNFSASSSACYSAGAAHAVSFDGSPPDEQLANSSFSPDPTIVGGKPLKMLSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFAQELISNLVRAIQKEPKGSFNLTRVLREAHANTKVKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTIFESPSQQHDFNFPYQLESGNGADLPSSGEVFTIPVASGDVVISGTDGLFDNLYNSEITGVVEHAIRAGLEPQVTAQKIAALARQRALSKSSRTPFSTAAEKAGFCYYGGKLDDITVVVSYISGSVSE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0558 423 ProSiteProfiles PPM-type phosphatase domain profile. 178 417 IPR001932 -
Gso11g0558 423 Gene3D - 187 319 IPR036457 -
Gso11g0558 423 PANTHER PROTEIN PHOSPHATASE 2C 36 422 IPR039123 -
Gso11g0558 423 Gene3D - 320 422 IPR036457 -
Gso11g0558 423 PANTHER PROTEIN PHOSPHATASE 36 422 - -
Gso11g0558 423 SUPERFAMILY PP2C-like 181 415 IPR036457 -
Gso11g0558 423 SMART PP2C_4 168 415 IPR001932 -
Gso11g0558 423 SMART PP2C_SIG_2 177 417 IPR001932 -
Gso11g0558 423 Pfam Stage II sporulation protein E (SpoIIE) 205 415 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0558 Gso-Chr11 5000672 5003715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0558 K17508 - gmx:100785804 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0558 11 5000672 5003715 Gso11g0558 11 5000672 5003715 ECH
Gso11g0558 11 5000672 5003715 Gso2g0489 2 5162046 5164846 PCT
Gso11g0558 11 5000672 5003715 Gso16g1132 16 30173446 30177938 PCT
Gso2g0489 2 5162046 5164846 Gso11g0558 11 5000672 5003715 PCT
Gso16g1132 16 30173446 30177938 Gso11g0558 11 5000672 5003715 PCT