Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1053 ATGGGTTCCATTGCAGAGGAGGAGGCTATGCCAAACCTAGTAGGCAGTGAGGAAAGGATTCTTGTTTCTGTTCGTGTGAGACCTCTGAATGAAAAGGAGCTCATAAGAAATGATCTTTCTGAATGGGAATGCATTAATGACACAACCATCATGTACAGGAGCAACCTTTCAGCTACAGAAAGGTCACTGTATCCAACAGCCTACACATTCGATCGAGTTTTTAGGACTGACAGCCCCACAAAGCAGGTGTATGAAGAAGCAGCTAAGGAAGTTGCTCTTTCAGTTCTCAGTGGCATCAACTCAAGCATTTTTGCTTATGGACAAACAAGCAGCGGAAAAACATACACCATGAGTGGTATAACAGATTTTGCCATAGCAGATATTTTCAACTACATAGAAAAGCACACGGAAAGGGAATTTGTTTTGAAGTTTTCAGCATTGGAGATCTATAATGAATCTGTCAGGGACCTCCTTAGTGTGGACAGTACACCTCTTAGACTTCTTGATGATCCAGAGAAAGGTACAGTTGTTGAGAGACTCACAGAGGAAACTTTAAGGGATTGGAGCCATTTTCAAGAACTTATTTCTTTCTGCGAAGCTCAAAGGCAGATAGGGGAGACTGCCCTGAATGAAGTGAGCTCCAGATCTCATCAGATTCTCAGACTGACAATTGAAAGTTCTGCTCGTGAATTTCTGGGAAATGACAAAATGAGCTCCCTTTCTGCTTCTGTGAATTTCGTTGATCTTGCTGGGAGTGAGCGTTCATCCCAAACAAATTCAGCTGGTACGAGGTTGAAAGAGGGTTGCCACATAAATCGTAGTTTACTAACTCTAGGAACTGTCATCCGCAAACTGAGTAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATACTGCAGTCCTCATTAGCAGGCAATGCTAAAACTGCAATCATCTGCACCATGAGCCCTGCAAGGAGCCATGTCGAACAAACAAGAAACACCCTTTTATTTGCAAGTTGTGCTAAAGAAGTGACAACTAATGCAAAAGTCAATGTAGTGGTGTCTGATAAGCTGTTGGTCAAGCAACTGCAAAAAGAGTTGGCTAGACTGGAAAGTGAGTTGAAAAATTCAGGGCCAACCCGCCTTAAATTTGATTCTGCAGCATTGCTGAAGGAAAAAGACCTCCAAATTGAGAGGCTAAAGAAAGAGGTAATGGATGTTTCGATGCAGCGGGACCTTGCTCAATCTCAAATTAAGGACATGCTACAAGTGGTTGGAGATGATGCGTCCTCAACTGAGCTGGACAGTTTAGGTCATCAATATCCCAAATTACGTGTGCGAAGTTCATTTGACTTTGAAAATCAAACAGCCGAACGACCAAATTTATCAAATTTTGACTGCATTGAGAGTGTCAGATCTTTTGATGCATCTCAATATTCAGATGGGCACAGTATTAGTTCTGATGATAACTATTTCCAACTCCCTGATTTGCAAAAGAACCTACCCGTCAGGATTTCTTCCCCTGCGATTTCTATTGTAAGTGGTGATGCTGCAAAGAATGATTTGGATCAGAAAAACGTTGAAGATAGTATAGGGGACCGTTGTAGGGAAGTTAGGTGCATTGAGTCAGATGATCTAACTACAAACACACACACACACTCTACTGCATCATCTCCAGCAGTCTCAGGATTAACTGAAGTTGATAATAGAGACAAAGAAAATCTAGATTTGTGTTCATCTGGGTTAAAGGACAACAAAGAAATAAACGGCTTGCAAGAACGTTTTGTTCTTCCCTCTCCTGAGAAAATATCTCCATGTCCGACACAAAGTAGTGCATCTAGTTCTAAAACCATGAAATTAACCAGAAGCAGAAGTTGTAAAGCAAGTCTCATGAGAGATCCATTTTCAGATTGGTTTGACCAAGAAGAAATGATTCAGAATACCCCCCCAATAGGAAGACCCGGGGGCCTTCAAAGGAAGACTTATACACTCAATTATAATCCCAATGCTGAGAGGTTATCATGGGCTGGTTACGAGAATTCTCTGGGAAGAGCTTCTGATGCACAGAATATGAAATCTTCCACCAATAATGGAAGTTACAACGATAATTCTTTAGCACCTGTAAGAAAAGAAAAGAATGATCTTGAAAGTTCAAATATGCAAGCGAATCTTGAGGTTCAAGAGACAGGAATGGAGTCCGATGTTACTACAAAGAAGTTCAAAGATGTTGGTTTGGACCCATTGCAATCTGAGGAAGAAAAACAGTTGGAATGGCCTTCAGAATTCAAGCGGCTGCAGAAAGAGATTATTGAACTCTGGCATGCCTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTGTTCAAAGGAGACCCTTCAGATTCTATCTATATGGAAGTAGAGCTAAGAAGGCTGTTCTATCTCAAGCAAACTTTTGACCAAGGGAATCAGACTGTGGAAGATGGACTTACCCCTGAATCAAGCAAGAGGTATCTTAGAGGAGAAAGACAGATGTTGAGCAAGCAAATGCAGAAGAAGCTGTCAAAATCTGAAAGAGAGAACCTGTACAATAATTGGGGAATTCGTTTGAGTTCAAAGAACAGAAGGTTGCACTTGGCCCATCGCTTGTGGTCAGAATCAGAAGACTTAGAGCACATTAGAGAGAGTGCCACCATTGTTGCAAAGCTGGTTGGTTCAGTAGAGCCAGATCAGGCTTTTAAGGAGATGTTTGGGCTCAACTTTGCCCCAAGGCGCACAAGAAAGAAATCGTTTGGTTGGACAGCCAGTATGAAGAATATTTTGTGA 2808 0.4163 MGSIAEEEAMPNLVGSEERILVSVRVRPLNEKELIRNDLSEWECINDTTIMYRSNLSATERSLYPTAYTFDRVFRTDSPTKQVYEEAAKEVALSVLSGINSSIFAYGQTSSGKTYTMSGITDFAIADIFNYIEKHTEREFVLKFSALEIYNESVRDLLSVDSTPLRLLDDPEKGTVVERLTEETLRDWSHFQELISFCEAQRQIGETALNEVSSRSHQILRLTIESSAREFLGNDKMSSLSASVNFVDLAGSERSSQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLAGNAKTAIICTMSPARSHVEQTRNTLLFASCAKEVTTNAKVNVVVSDKLLVKQLQKELARLESELKNSGPTRLKFDSAALLKEKDLQIERLKKEVMDVSMQRDLAQSQIKDMLQVVGDDASSTELDSLGHQYPKLRVRSSFDFENQTAERPNLSNFDCIESVRSFDASQYSDGHSISSDDNYFQLPDLQKNLPVRISSPAISIVSGDAAKNDLDQKNVEDSIGDRCREVRCIESDDLTTNTHTHSTASSPAVSGLTEVDNRDKENLDLCSSGLKDNKEINGLQERFVLPSPEKISPCPTQSSASSSKTMKLTRSRSCKASLMRDPFSDWFDQEEMIQNTPPIGRPGGLQRKTYTLNYNPNAERLSWAGYENSLGRASDAQNMKSSTNNGSYNDNSLAPVRKEKNDLESSNMQANLEVQETGMESDVTTKKFKDVGLDPLQSEEEKQLEWPSEFKRLQKEIIELWHACNVSLVHRTYFFLLFKGDPSDSIYMEVELRRLFYLKQTFDQGNQTVEDGLTPESSKRYLRGERQMLSKQMQKKLSKSERENLYNNWGIRLSSKNRRLHLAHRLWSESEDLEHIRESATIVAKLVGSVEPDQAFKEMFGLNFAPRRTRKKSFGWTASMKNIL* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1053 935 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1053 935 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 935 - -
Gso16g1053 935 Pfam Domain of unknown function (DUF3490) 760 917 IPR021881 -
Gso16g1053 935 MobiDBLite consensus disorder prediction 685 704 - -
Gso16g1053 935 Gene3D Kinesin motor domain 12 374 IPR036961 -
Gso16g1053 935 MobiDBLite consensus disorder prediction 602 619 - -
Gso16g1053 935 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1053 935 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1053 935 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1053 935 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1053 935 Coils Coil 389 416 - -
Gso16g1053 935 MobiDBLite consensus disorder prediction 547 567 - -
Gso16g1053 935 PANTHER CENTROMERE PROTEIN E 2 935 - -
Gso16g1053 935 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1053 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 375 IPR027417 -
Gso16g1053 935 MobiDBLite consensus disorder prediction 598 619 - -
Gso16g1053 935 CDD KISc_CENP_E 20 343 - -
Gso16g1053 935 MobiDBLite consensus disorder prediction 547 563 - -
Gso16g1053 935 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1053 935 Coils Coil 352 372 - -
Gso16g1053 935 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1053 Gso-Chr16 28663908 28671491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1053 20 373 Miscellaneous Gene Families AT2G21380 46.389 1.28e-85 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1053 K11498 - gmx:100775190 1799.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0429 2 4499741 4508205 Gso16g1053 16 28663908 28671491 GST
Gso11g0634 11 5647874 5656609 Gso16g1053 16 28663908 28671491 PCT
Gso16g1053 16 28663908 28671491 Gso11g0634 11 5647874 5656609 PCT