Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0634 ATGGATTCTGTTGGAGGGGAAGAGGCAATTCAAGAGCCTACAGACCATGATGAGAGGATTCTTGTTTCGGTTCGTCTTCGTCCCCTTAATGAAAAGGAGCTTGCAAGAAATGATGTTTCAGATTGGGAATGCATCAATGACACCACCATCATATACAGGAGCAACCTTTCAGCTACTGACAGGTCACTCTACCCAACAGCATATTCCTTTGACAGTGTGTTTCGAACAGATTCTTCTACAAGGCAGGTGTATGAAAAAGCAGCTAAGGAAGTTGCTCTTTCAGTTGTCGGTGGCATCAACTCAAGCATTTTTGCATATGGACAAACAAGTAGTGGGAAGACATACACCATGAGTGGCATAACTGAATACACAGTGGCAGACATTTTTAACTACATTGAAAAGCACACGGAAAGAGAATTCATGTTGAAGTTTTCGGCAATTGAGATTTATAATGAATCTGTAAGGGACCTCCTTAGTCCAGACTGTACCCCTCTCAGACTTCTCGATGATCCAGAGAGAGGGACAGTTGTTGAGAGACTGACTGAGGAAACTTTAGGAGATTGGAACCATTTTACAGAACTTATTTCTTTCTGTGAAGCTCAAAGGCAGATAGGGGAGACAGCACTGAATGAAGCAAGCTCCAGATCTCATCAAATTCTAAGACTGACAATTGAAAGTTCTGCACGTGAATTCCTTGGAAATGACAAGTCTAGCTCTCTTTCTGCTTCAGTGAATTTTGTTGATCTTGCTGGTAGCGAGCGAGCATCCCAAACCCATTCAGCTGGCACGAGATTGAAAGAGGGTTGCCACATAAATCGTAGCTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGACATATTCCTTTCAGAGATTCAAAGCTAACCCGCATATTGCAGTCCTCATTAGGAGGCAATGCTAGAACTGCTATCATCTGCACCATGAGCCCTGCCCGGAGCCATGTTGAACAAACCAGAAACACACTCTTATTTGCAAGCTGTGCTAAAGAAGTGTCAACTAATGCACAAGTCAATGTAGTGGTGTCTGATAAAGCACTAGTCAAGCAATTACAAAAAGAGTTGGCTAGACTGGAAGATGAATTGAGAAATTCAGGGCCAGCCCACCTTACTTCTGAGACTGCAGCATTGTTGAGAGAAAAAGACCGTCAGATCGATATGTTAAAGAAAGAGGTAAGAGAGCTGACCTTGCAGCGGGACCTTGCACAATCTCGAATAAGTGACATGCTCCGAGTGCATGGAGAAGATGTGGCTACAATAGAACTGCAAAGTATGGATCCTCAATATCCAAATTTACACATGAGAAATTCATGGAACTTTGAAAATCAAAGAGAGGAGCCAAATGTATTAAGTCTTGATGGTGAAGAGAGTGTCAGGTCTTTTGATGCATCTCAATATTCAGATGGACATAGTTTTAGTTCTGATGAAAACTTATTCCAACTCCCTGACCTTGAAAAGAATCTTCTGGTCAGAAATTCTCCCCCAGGGTTGCCAGTCAAAAGGACTGATGCTGTACCGAATGATTTGGATCAGAAACGCATTGAAGAACAGCATGAAGAGGACAATTGTAAGGAAGTTAGATGCATTGAGTTGGAAGATGTAATCACAAACACACATAAACACTCAAATACATCAGATTTAAGATCAAATACATACACTGATTCTAATGCATCATCTCCTAGTGCAAACACAGCTATCTCAGGATTGATTGTAGTTGATAATAGAGACAAGGAAAAAGTAGTAGATTTGAGTTCATCTGGGTCAAAGGAAGACAAAAGATTGAACCATTTGCACCAAGATTTTGTTCTTCCCTCTCCAAAAGAAATTTCTGTGTGCATGACAGGAAACAGTACAAGTAGTTCTAGAACTTTGAAGTTGAGCCGAAGTAGAAGTTGTAAAGCAAGTATCATGAGGAATTTATCTTCAGATTGGTTTGAAGATGTAGACGTAATTCAGAACACTCCTCCAATAGGGATTGAAAAAGCCTTCCCTGGAAGACCGGAGGGCTTTCCGAAGAACATTTATGCACTAAACTATAATGCCAATGCAGAAAGGCTTTCATGTAATGGCCATGGGAATTCTGTACAAAATTCTTCTGTTGATGATGTACAGAATGTGAAATCCTCCACTAACAAGGAAAGAGAGGGAACAGAAAATATTAACAGGTTGAATTTACTGGCTGGCCATGAGGTTCCGGGGACAGGATTGGATTATGCAAAGAATGTCAAAGATATTGGCTTGGACCCCATGCAAACTGATGGAGAAAGTCTCTCACACTCACACTGGCCTTCAAAATTCCAGAGGCTGCAAAGAGAGATCATTGAATTCTGGGATGCTTGTAATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTATTCAAGGGGGAACCATCAGATTCTATTTATATGGAGGTAGAGTTGAGAAGACTATCATACCTCAAGCAAACGTTTTCCCAAGGCAATCAGACTGTGGAAGATGGACGAACCCTCGCACCTGAGTTAAGCATGAGATATCTTAGAAAAGAGAGGCAGATGCTGAGCAAGCAAATGCATAAGAGACTGTCTAAATATGATAGGCAGAACCTGTACTTGAGATGGGGCCTTCGTTTGAGTTCAAAGCATAGGAGTTTGCAGTTGGCCCATCAATTGTGGAGTGACACAAAAGACATGGACCACGTTAGAGACAGTGCATCAATTGTTGCAAAGCTGGTTGGTTTAGTAGAGCCAGAACAAGCATTTAAGGAGATGTTTGGACTCAACTTTACCCCACAACCTACGAGTAGGAAATCTTTTAGTTGGACAGCCAGTGTGAGGCACATTTTGTGA 2862 0.4161 MDSVGGEEAIQEPTDHDERILVSVRLRPLNEKELARNDVSDWECINDTTIIYRSNLSATDRSLYPTAYSFDSVFRTDSSTRQVYEKAAKEVALSVVGGINSSIFAYGQTSSGKTYTMSGITEYTVADIFNYIEKHTEREFMLKFSAIEIYNESVRDLLSPDCTPLRLLDDPERGTVVERLTEETLGDWNHFTELISFCEAQRQIGETALNEASSRSHQILRLTIESSAREFLGNDKSSSLSASVNFVDLAGSERASQTHSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARSHVEQTRNTLLFASCAKEVSTNAQVNVVVSDKALVKQLQKELARLEDELRNSGPAHLTSETAALLREKDRQIDMLKKEVRELTLQRDLAQSRISDMLRVHGEDVATIELQSMDPQYPNLHMRNSWNFENQREEPNVLSLDGEESVRSFDASQYSDGHSFSSDENLFQLPDLEKNLLVRNSPPGLPVKRTDAVPNDLDQKRIEEQHEEDNCKEVRCIELEDVITNTHKHSNTSDLRSNTYTDSNASSPSANTAISGLIVVDNRDKEKVVDLSSSGSKEDKRLNHLHQDFVLPSPKEISVCMTGNSTSSSRTLKLSRSRSCKASIMRNLSSDWFEDVDVIQNTPPIGIEKAFPGRPEGFPKNIYALNYNANAERLSCNGHGNSVQNSSVDDVQNVKSSTNKEREGTENINRLNLLAGHEVPGTGLDYAKNVKDIGLDPMQTDGESLSHSHWPSKFQRLQREIIEFWDACNVSLVHRTYFFLLFKGEPSDSIYMEVELRRLSYLKQTFSQGNQTVEDGRTLAPELSMRYLRKERQMLSKQMHKRLSKYDRQNLYLRWGLRLSSKHRSLQLAHQLWSDTKDMDHVRDSASIVAKLVGLVEPEQAFKEMFGLNFTPQPTSRKSFSWTASVRHIL* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0634 953 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0634 953 Pfam Domain of unknown function (DUF3490) 776 936 IPR021881 -
Gso11g0634 953 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0634 953 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0634 953 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0634 953 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0634 953 PANTHER CENTROMERE PROTEIN E 2 953 - -
Gso11g0634 953 Coils Coil 389 416 - -
Gso11g0634 953 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 953 - -
Gso11g0634 953 MobiDBLite consensus disorder prediction 552 572 - -
Gso11g0634 953 CDD KISc_CENP_E 20 343 - -
Gso11g0634 953 Gene3D Kinesin motor domain 10 374 IPR036961 -
Gso11g0634 953 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 375 IPR027417 -
Gso11g0634 953 Coils Coil 352 372 - -
Gso11g0634 953 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g0634 953 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso11g0634 953 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0634 Gso-Chr11 5647874 5656609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0634 8 373 Miscellaneous Gene Families AT2G21380 44.504 3.81e-84 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0634 K11498 - gmx:100802226 1879.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0634 11 5647874 5656609 Gso11g0634 11 5647874 5656609 ECH
Gso11g0634 11 5647874 5656609 Gso2g0429 2 4499741 4508205 PCT
Gso11g0634 11 5647874 5656609 Gso16g1053 16 28663908 28671491 PCT
Gso2g0429 2 4499741 4508205 Gso11g0634 11 5647874 5656609 PCT
Gso16g1053 16 28663908 28671491 Gso11g0634 11 5647874 5656609 PCT