Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1016 ATGGCTGACATAGTGAAGCAACTGTTGGCAAAGCCGATCCAGCTGGCGGACCAAGTGGCCAAGGCAGCGGAAGAGGCCAGTTCCTCCTTCAAGCAAGAGTGTTTAGAGCTGAAATCCAAGACGGAGAAGCTGGCCGGGCTGCTCCGGCAGGCGGCCCGTGCCAGCTCCGACCTCTACGAGCGGCCCACGCGGCGCATCATCGCCGACACCGAACTGGTCCTCGACAAGGCCCTCTCTCTAACCCTAAAGTGCCGCGCCAACGGCCTCATGAAACGCGTCTTCAGCATCATCCCCGCCGCCGCCTTCCGCAAGATGTCCTCCCAGCTGGAGAACTCCATCGGCGATGTCTCCTGGCTCCTCCGCGTCTCCGCCCCCGCCGAGGACCGCGCCGACACCGAGTACCTCGGTCTCCCCCCCATCGCTGCCAACGAGCCCATCCTCGGCCTCATCTGGGAGCAGGTCGCCATCCTCCACACCGGCTCCCTCGATGACCGCTCCGATGCTGCCGCCTCCCTCGTGTCGCTCGCACGTGACAACGACCGCTACGGCAAATTAATCATCGAGGAAGGCGGCGTCGGACCCTTACTGAAGCTTATCAAAGAAGGCAAAAAAGAAGGGCAAGAGAACGCCGCAAGAGCAATTGGGCTTCTCGGCCGTGACCCTGAGAGCGTGGAACTCATGATCCACGCTGGTGTTTGCTCTGTCTTCGCCAAAGTCCTCAAAGAAGGTCCCATGAAAGTGCAAGCCGTGGTGGCTTGGGCCGTGTCGGAATTAGCTGCGAAATACCCTACATGCCAAGATCTTTTCGCTCAGCATAACATCGTTCGGTTGCTTGTAAGTCATCTTGCGTTTGAAACCGTTCAGGAGCATAGTAAATACGCCATTGTTAGCAACAAACCTACATCAATTCATGCTGTTGTGATGGCTAGTAATAATAGTGGTAATAATTCTAATGGCAATAGTAGTGTGAAGAAGGATAGTGAAGATGAGGAGAAGCAGATGCAGAGTAGGATGCAGCATCCCTTGGGTGATAGGTCAACAAATCAGATGCATAGAGTGGTCACAAGTACCATGGCAATGCATGCTGCCAACAAGCAGCAACAGCCCAATCAAGGCAATGAAGGAACTCTGAACTTGCAGGGTCCGAAAGTGAATGGTAATGGCAAGCAAAACCATCAGTCTCACCAGCAAAGCTTCTCGTATTCCGGGATTAACATGAAGGGGAGGGAACTTGAGGACCCTGAGAATAAGGCCTACATGAAAGCAATGGCCGCGAGGGCGCTCCGGCAGCTGGCCAAGGGTAATGTGGCCATTTGCCGGAGCATCACGGAGTCCAGGGCTCTGTTGTGCTTTGCCATACTGCTTGAGAAAGGGTCTGAGGATGTGAAGTACAACTCTGCCCTGGCAGTGAAGGAGATCACGGCAGTGGCAGAGAAAGATGCTGAATTGAGAAGATCGGCATTCAAGCCGAATTCTCCGGCCTGCAAGGCGGTTGTTGATCAAGTGCTTAAGATCATAGAGAAGGAAGATACAAAACTCTTGATTCCTTGCGTAAAGGCTATTGGGAATCTGGCAAGGACGTTCCGAGCAACGGAGACGAGGATAATCGGTCCCTTGGTCCGGCTTCTTGACGAAAGAGAGGCTGAAGTGTCTAGGGAAGCAGCTATCTCTCTCACGAAATTTGCTTCCTCGGAAAACTACCTCCACCTTGATCACTCCAAGGCAATCATAAGTGCCGGTGGTGCGAAACACTTGGTCCAGCTTGTGTATCTTGGAGAACAGACAGTTCAGATTTCAGCACTAGTTCTGCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTAGGGCTGAGGTGCTTGGAGTGCTTGAATGGGCTTCCAAGCAACCAAACGTGACGCAGGACGAAACCCTCGAGGCATTGTTGCAGGAATCCAAGGGTAGGCTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCAAAAATTACATCAATAG 2007 0.5331 MADIVKQLLAKPIQLADQVAKAAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIADTELVLDKALSLTLKCRANGLMKRVFSIIPAAAFRKMSSQLENSIGDVSWLLRVSAPAEDRADTEYLGLPPIAANEPILGLIWEQVAILHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMIHAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPTCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSGNNSNGNSSVKKDSEDEEKQMQSRMQHPLGDRSTNQMHRVVTSTMAMHAANKQQQPNQGNEGTLNLQGPKVNGNGKQNHQSHQQSFSYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNVAICRSITESRALLCFAILLEKGSEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEDTKLLIPCVKAIGNLARTFRATETRIIGPLVRLLDEREAEVSREAAISLTKFASSENYLHLDHSKAIISAGGAKHLVQLVYLGEQTVQISALVLLSYIALHVPDSEELARAEVLGVLEWASKQPNVTQDETLEALLQESKGRLELYQSRGSRGFQKLHQ* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1016 668 Gene3D - 3 122 IPR036537 GO:0007166
Gso16g1016 668 SMART arm_5 491 526 IPR000225 GO:0005515
Gso16g1016 668 SMART arm_5 178 219 IPR000225 GO:0005515
Gso16g1016 668 SMART arm_5 435 475 IPR000225 GO:0005515
Gso16g1016 668 SMART arm_5 569 609 IPR000225 GO:0005515
Gso16g1016 668 SMART arm_5 220 260 IPR000225 GO:0005515
Gso16g1016 668 Pfam Armadillo/beta-catenin-like repeat 185 216 IPR000225 GO:0005515
Gso16g1016 668 MobiDBLite consensus disorder prediction 323 338 - -
Gso16g1016 668 Gene3D - 406 654 IPR011989 -
Gso16g1016 668 SUPERFAMILY ARM repeat 155 636 IPR016024 -
Gso16g1016 668 MobiDBLite consensus disorder prediction 309 346 - -
Gso16g1016 668 MobiDBLite consensus disorder prediction 361 397 - -
Gso16g1016 668 PANTHER - 1 663 - -
Gso16g1016 668 PANTHER ARMADILLO REPEAT ONLY 4 1 663 - -
Gso16g1016 668 Gene3D - 151 332 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1016 Gso-Chr16 27931240 27934157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1016 - - gmx:100794693 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0653 11 5864335 5866749 Gso16g1016 16 27931240 27934157 PCT