Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0653 ATGGGTGATATAGTGAAACAAATATTGGCGAAGCCGATCCAGCTGGCGGACCAAGTAACCAAAGCCGCCGACGAAGCCAGCTCCTTCAAGCAGGAATGCGGCGAGCTGAAGGCGAAGACGGAGAAGCTGGCGGCGCTGCTGCGTCAGGCGGCTCGTGCGAGTTCCGATCTCTACGAGCGTCCCACGCGCCGCATCATCGACGAAACAGAACACGTCCTCGACAAGGCCCTCGCCTTGGCCCTCAAGTGCCGCGGCAACGCCCTCATGAAGCGCGTCTTCACCCTCAACCCCGGCGCCGCGTTCCGCAAGGTCTCCTTGCTCCTCGAGAACTCCATCGGCGACGTCTCCTGGCTCCTCCGGGTCTCCGCCGGAGACGGCGGCGGAGACTACATCGGCGGGCTCCCTCCGATAGCGACGAACGAGCCGATCCTCTGCTTCATCTGGGAGCAGATCGCCGTCCTCCACACGGGTACCTTGGAGGACCGCTCCGACGCCGCCGCGCAGCTGGTCTCCCTGGCCAGCAACAGCGACCGCTACGGGAAGCTCATAATCGAAGAAGGCGGGGTGGGCCCACTCCTGAAGCTTCTGAAGGAAGGAAAAGCCGAAGGGCAGGAACACGCGGCACGTGCCATCGGGCTTCTGGGGCGTGATCCCGAGAGCGTTGATAACATGATTCACGTGGGCGCGTGTTCCGTGTTCGCGAAGATCCTGAAAGAAAGTCCTATGAAAGTGCAAGCTGTCGTGGCCTGGGCTGTGTCGGAACTCGCTGCCAATTACCCTAAGTGTCAGGACCTTTTCGCCCAGCACAACATCATAAGGTTACTCGTCGGTCACCTTGCTTTCGAAACCGTCGAGGAACACAGTAAGTACACTATTGTCAGCACCAAACCCACTTCCATCCACGCCGTCGTCATCGCCAACAACAACGTCAAGAAGGAAGATCATTTTCACGACAATGAAAAGAAAGCACGAATGCCTCATCCCTTGGGTGATAATAGACCACGAAATCTACATAGAGTAATCACAAGTACAATCGCAATGCACGCTGCCACCAAGCAAGGAAACGAACCAAATCATAATCATCAGACCAATGGCAATGGAGTTGATAATGATGCCAAGCAAGGGAATCAGAATCACCAGCGAAACTATTCACATTCGGGGATAAACATGAAAGGAAGGGATCATGAGGATCCTCAGACTAAGGCTAACATGAAGGAAATGGCAGCGAGAGCTCTCTGGCATTTAGCCAAAGGTAACTCGCCAATTTGTCGTAGCATTACTGAATCAAGAGCCCTGTTGTGTTTTTCTGTTCTTCTTGAAAAAGGAACAGAGGCTGTGCAGTACAATTCAGCTATGGCGGTGATGGAGATTACATCAGTGGCAGAGAAAGATGCCGAATTAAGAAAATCCGCGTTCAAACCCAACTCTCCTGCTTGTAAAGCCGTTGTTGATCAAGTTGTTAAGATAATTGAAAAAGCGGATTCGGATCTTTTGATTCCGTGCATCAAGACGATTGGGAATCTGGCGAGGACCTTCAAGGCGACGGAGACGAGGATGATAGGGCCATTGGTGAAGCTTCTCGACGAAAGGGAAGCGGAGGTGTCAAGGGAAGCATCTATTGCGCTAACGAAATTCGCGTGCACGGAGAACTACCTTCACGTGGATCATTCCAAGGCCATTATAAGTGCCGGTGGAGCGAAGCACTTGATTCAGCTAGTGTATTTTGGAGAAGAGATGGTTAAGATTCCTGCGCTGGTTTTGCTCTCATACACTGCAATGCACGTGCCGGATAGCGAGGAACTTGCTCAGGCTGAGGTGCTGGGAGTCATTGATTGGGCATCCAAGCAATCTTCCATTGCCAACGACCCAGCAATCGAGGCGTTGTTGTTGGAGTCCAAGAGCAGGTTGGAGCTTTACCAGTCTAGAGGTCCAAGAGGATTCCATAAATTGCATTTGCATTTGCATCAATAG 1971 0.5277 MGDIVKQILAKPIQLADQVTKAADEASSFKQECGELKAKTEKLAALLRQAARASSDLYERPTRRIIDETEHVLDKALALALKCRGNALMKRVFTLNPGAAFRKVSLLLENSIGDVSWLLRVSAGDGGGDYIGGLPPIATNEPILCFIWEQIAVLHTGTLEDRSDAAAQLVSLASNSDRYGKLIIEEGGVGPLLKLLKEGKAEGQEHAARAIGLLGRDPESVDNMIHVGACSVFAKILKESPMKVQAVVAWAVSELAANYPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYTIVSTKPTSIHAVVIANNNVKKEDHFHDNEKKARMPHPLGDNRPRNLHRVITSTIAMHAATKQGNEPNHNHQTNGNGVDNDAKQGNQNHQRNYSHSGINMKGRDHEDPQTKANMKEMAARALWHLAKGNSPICRSITESRALLCFSVLLEKGTEAVQYNSAMAVMEITSVAEKDAELRKSAFKPNSPACKAVVDQVVKIIEKADSDLLIPCIKTIGNLARTFKATETRMIGPLVKLLDEREAEVSREASIALTKFACTENYLHVDHSKAIISAGGAKHLIQLVYFGEEMVKIPALVLLSYTAMHVPDSEELAQAEVLGVIDWASKQSSIANDPAIEALLLESKSRLELYQSRGPRGFHKLHLHLHQ* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0653 656 Gene3D - 3 121 IPR036537 GO:0007166
Gso11g0653 656 Gene3D - 393 472 IPR011989 -
Gso11g0653 656 PANTHER ARMADILLO REPEAT ONLY 4 1 648 - -
Gso11g0653 656 PANTHER - 1 648 - -
Gso11g0653 656 Gene3D - 473 616 IPR011989 -
Gso11g0653 656 Gene3D - 151 313 IPR011989 -
Gso11g0653 656 SUPERFAMILY ARM repeat 152 610 IPR016024 -
Gso11g0653 656 Coils Coil 36 56 - -
Gso11g0653 656 MobiDBLite consensus disorder prediction 353 398 - -
Gso11g0653 656 Pfam Armadillo/beta-catenin-like repeat 182 213 IPR000225 GO:0005515
Gso11g0653 656 SMART arm_5 419 459 IPR000225 GO:0005515
Gso11g0653 656 SMART arm_5 553 593 IPR000225 GO:0005515
Gso11g0653 656 SMART arm_5 175 216 IPR000225 GO:0005515
Gso11g0653 656 SMART arm_5 475 510 IPR000225 GO:0005515
Gso11g0653 656 SMART arm_5 217 257 IPR000225 GO:0005515
Gso11g0653 656 MobiDBLite consensus disorder prediction 353 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0653 Gso-Chr11 5864335 5866749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0653 - - gmx:100801498 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0653 11 5864335 5866749 Gso11g0653 11 5864335 5866749 ECH
Gso11g0653 11 5864335 5866749 Gso16g1016 16 27931240 27934157 PCT
Gso2g0406 2 4307152 4309472 Gso11g0653 11 5864335 5866749 PCT